Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   C7K40_RS09425 Genome accession   NZ_CP027771
Coordinates   1868665..1869441 (+) Length   258 a.a.
NCBI ID   WP_023612855.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain DMG1800716     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1863665..1874441
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7K40_RS09405 (C7K40_09400) - 1865245..1866267 (-) 1023 Protein_1750 IS30 family transposase -
  C7K40_RS09415 (C7K40_09410) rlmH 1866662..1867141 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  C7K40_RS09420 (C7K40_09415) htrA 1867353..1868576 (+) 1224 WP_023612860.1 trypsin-like peptidase domain-containing protein Regulator
  C7K40_RS09425 (C7K40_09420) spo0J 1868665..1869441 (+) 777 WP_023612855.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29141.98 Da        Isoelectric Point: 10.3728

>NTDB_id=280473 C7K40_RS09425 WP_023612855.1 1868665..1869441(+) (spo0J) [Streptococcus pyogenes strain DMG1800716]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEERKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=280473 C7K40_RS09425 WP_023612855.1 1868665..1869441(+) (spo0J) [Streptococcus pyogenes strain DMG1800716]
ATGACAAAAGAATTATTGATAGACTTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATTATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCAATCATTAAAGCAATTGAAGAAAGAAAAATTAGCGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.366

99.612

0.581


Multiple sequence alignment