Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   C7K40_RS08900 Genome accession   NZ_CP027771
Coordinates   1771419..1772132 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain DMG1800716     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1766419..1777132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7K40_RS08890 (C7K40_08885) treC 1767489..1769117 (-) 1629 WP_063629587.1 alpha,alpha-phosphotrehalase -
  C7K40_RS08895 (C7K40_08890) treP 1769184..1771208 (-) 2025 WP_023613012.1 PTS system trehalose-specific EIIBC component -
  C7K40_RS08900 (C7K40_08895) treR 1771419..1772132 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  C7K40_RS08910 (C7K40_08905) - 1772378..1772748 (-) 371 Protein_1652 helix-turn-helix domain-containing protein -
  C7K40_RS08915 (C7K40_08910) - 1772935..1773792 (+) 858 WP_023613004.1 VOC family protein -
  C7K40_RS08920 (C7K40_08915) yaaA 1773834..1774565 (+) 732 WP_023612988.1 peroxide stress protein YaaA -
  C7K40_RS08925 (C7K40_08920) nrdG 1774739..1775353 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  C7K40_RS08930 (C7K40_08925) - 1775353..1775862 (-) 510 WP_011285262.1 GNAT family N-acetyltransferase -
  C7K40_RS08935 (C7K40_08930) - 1775871..1776806 (-) 936 WP_002992828.1 Gfo/Idh/MocA family oxidoreductase -
  C7K40_RS09530 - 1776835..1776981 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=280469 C7K40_RS08900 WP_002982243.1 1771419..1772132(+) (treR) [Streptococcus pyogenes strain DMG1800716]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=280469 C7K40_RS08900 WP_002982243.1 1771419..1772132(+) (treR) [Streptococcus pyogenes strain DMG1800716]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment