Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   C7K40_RS02540 Genome accession   NZ_CP027771
Coordinates   466274..466999 (+) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain DMG1800716     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 461274..471999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7K40_RS02510 (C7K40_02510) - 461453..462913 (+) 1461 WP_014635654.1 NCS2 family permease -
  C7K40_RS02515 (C7K40_02515) tsaE 463067..463528 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  C7K40_RS02520 (C7K40_02520) - 463503..464027 (+) 525 WP_002994338.1 N-acetyltransferase -
  C7K40_RS02525 (C7K40_02525) - 464036..465319 (+) 1284 WP_002983372.1 LCP family protein -
  C7K40_RS02530 (C7K40_02530) - 465430..465786 (-) 357 WP_002988657.1 hypothetical protein -
  C7K40_RS02535 (C7K40_02535) - 465783..466202 (-) 420 WP_002983376.1 HIT family protein -
  C7K40_RS02540 (C7K40_02540) pptA 466274..466999 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  C7K40_RS02545 (C7K40_02545) - 467002..468036 (+) 1035 WP_063629681.1 ABC transporter permease -
  C7K40_RS02550 (C7K40_02550) ccrZ 468100..468891 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  C7K40_RS02555 (C7K40_02555) trmB 468891..469526 (+) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  C7K40_RS02565 (C7K40_02565) rimP 469786..470322 (+) 537 WP_030127299.1 ribosome maturation factor RimP -
  C7K40_RS02570 (C7K40_02570) nusA 470497..471654 (+) 1158 WP_002988817.1 transcription termination factor NusA -
  C7K40_RS02575 (C7K40_02575) - 471670..471966 (+) 297 WP_002983486.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=280443 C7K40_RS02540 WP_002983379.1 466274..466999(+) (pptA) [Streptococcus pyogenes strain DMG1800716]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=280443 C7K40_RS02540 WP_002983379.1 466274..466999(+) (pptA) [Streptococcus pyogenes strain DMG1800716]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment