Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   C7J90_RS04610 Genome accession   NZ_CP027770
Coordinates   981750..982718 (+) Length   322 a.a.
NCBI ID   WP_103210062.1    Uniprot ID   -
Organism   Staphylococcus felis strain ATCC 49168     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 976750..987718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7J90_RS04585 (C7J90_04585) - 976762..977997 (-) 1236 WP_103207215.1 aminoacyltransferase -
  C7J90_RS04590 (C7J90_04590) - 978214..978636 (+) 423 WP_103210069.1 universal stress protein -
  C7J90_RS04595 (C7J90_04595) - 979078..979959 (+) 882 WP_103210067.1 LysR family transcriptional regulator -
  C7J90_RS04600 (C7J90_04600) - 980076..980465 (+) 390 WP_232332032.1 CidA/LrgA family protein -
  C7J90_RS04605 (C7J90_04605) - 980465..981148 (+) 684 WP_103210063.1 LrgB family protein -
  C7J90_RS11970 - 981370..981546 (+) 177 WP_167388987.1 hypothetical protein -
  C7J90_RS04610 (C7J90_04610) ceuB 981750..982718 (+) 969 WP_103210062.1 ABC transporter permease Machinery gene
  C7J90_RS04615 (C7J90_04615) - 982702..983667 (+) 966 WP_232618932.1 iron chelate uptake ABC transporter family permease subunit -
  C7J90_RS04620 (C7J90_04620) - 983664..984482 (+) 819 WP_103210058.1 ATP-binding cassette domain-containing protein -
  C7J90_RS04625 (C7J90_04625) - 984485..985519 (+) 1035 WP_103210056.1 ABC transporter substrate-binding protein -
  C7J90_RS04630 (C7J90_04630) - 985635..986075 (-) 441 WP_106465101.1 MarR family transcriptional regulator -
  C7J90_RS04635 (C7J90_04635) - 986209..986838 (+) 630 WP_103210054.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35380.72 Da        Isoelectric Point: 9.7035

>NTDB_id=280400 C7J90_RS04610 WP_103210062.1 981750..982718(+) (ceuB) [Staphylococcus felis strain ATCC 49168]
MRILMNGYVLLVILCILTVCSLFIGVSSVSVADVFRLDDKQLNILFASRIPRTVSILIAGSSLALSGLIMQQMMQNKFVS
PTTAGTMEWAKLGILISLIFFPSQHIFLKLIFAVLCSVIGTFLFVQIIQRIQFKDVVFVPLVGIMIGGIVSSFSTFIALQ
TNAVQSIGNWLNGNFAIITSGRYEVLYLSLPLLILTYVYANQFTIAGMGRDFSQSLGLNYQFVMNMGLMIIATITALVVV
TVGTLPFLGLIVPNIVAIFKGDHLKFALPHTAMLGAIFVMISDILGRLIVYPYEINIGLTIGVFGTVIFILMLMKGRHQY
AQ

Nucleotide


Download         Length: 969 bp        

>NTDB_id=280400 C7J90_RS04610 WP_103210062.1 981750..982718(+) (ceuB) [Staphylococcus felis strain ATCC 49168]
ATGCGAATTTTAATGAATGGTTATGTTTTATTGGTCATCCTCTGTATTCTTACTGTTTGTTCCTTATTTATTGGTGTGAG
TAGTGTTTCGGTAGCGGATGTGTTTCGTTTGGATGATAAGCAACTTAATATTTTATTTGCTAGTCGTATTCCTAGAACGG
TAAGTATCCTTATTGCTGGTAGTAGCCTAGCTTTGTCAGGATTAATAATGCAACAGATGATGCAAAATAAATTCGTGAGT
CCGACGACTGCAGGAACGATGGAGTGGGCGAAACTTGGGATATTGATTTCGTTGATTTTTTTTCCATCGCAGCATATTTT
TTTGAAGCTCATCTTTGCGGTTCTCTGTAGTGTGATAGGAACATTTTTATTTGTTCAAATTATTCAACGTATTCAGTTTA
AAGACGTGGTTTTTGTCCCTTTAGTTGGCATTATGATAGGTGGTATTGTTTCTAGTTTTTCAACGTTTATCGCTTTACAA
ACAAATGCTGTACAAAGTATTGGAAACTGGTTAAATGGCAATTTTGCGATTATTACAAGTGGGCGATATGAAGTTTTATA
TCTTAGTTTACCGCTACTCATATTGACATATGTATACGCTAATCAGTTTACAATAGCAGGTATGGGACGTGATTTTAGCC
AAAGTTTAGGTTTGAATTATCAATTTGTTATGAATATGGGATTAATGATTATTGCAACAATTACTGCATTAGTTGTTGTA
ACTGTAGGAACGTTACCTTTTTTAGGTTTGATTGTCCCAAATATAGTAGCTATTTTTAAAGGTGATCACTTAAAGTTTGC
TTTGCCTCACACAGCGATGCTCGGAGCGATTTTTGTAATGATTTCAGATATTTTAGGTCGTTTAATCGTTTATCCATATG
AAATCAATATTGGTCTAACAATTGGTGTATTTGGAACTGTGATTTTCATCTTAATGTTGATGAAAGGGCGTCATCAATAT
GCACAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(14-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

49.84

97.205

0.484

Multiple sequence alignment