Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4J83_RS28375 Genome accession   NZ_CP027762
Coordinates   6103195..6103602 (-) Length   135 a.a.
NCBI ID   WP_106575669.1    Uniprot ID   A0A7M1KEX5
Organism   Pseudomonas sp. LBUM920     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6098195..6108602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4J83_RS28360 (C4J83_5623) - 6100198..6102249 (-) 2052 WP_119737461.1 methyl-accepting chemotaxis protein -
  C4J83_RS28365 (C4J83_5624) - 6102246..6102770 (-) 525 WP_119737459.1 chemotaxis protein CheW -
  C4J83_RS28370 (C4J83_5625) pilH 6102783..6103148 (-) 366 WP_003234583.1 twitching motility response regulator PilH -
  C4J83_RS28375 (C4J83_5626) pilG 6103195..6103602 (-) 408 WP_106575669.1 twitching motility response regulator PilG Regulator
  C4J83_RS28380 (C4J83_5628) gshB 6103842..6104795 (+) 954 WP_106575670.1 glutathione synthase -
  C4J83_RS28385 (C4J83_5629) - 6104872..6105777 (+) 906 WP_106575671.1 energy transducer TonB -
  C4J83_RS28395 (C4J83_5630) - 6106073..6106642 (+) 570 WP_106575672.1 YqgE/AlgH family protein -
  C4J83_RS28400 (C4J83_5631) ruvX 6106642..6107079 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  C4J83_RS28405 (C4J83_5632) pyrR 6107152..6107658 (+) 507 WP_106575674.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14950.46 Da        Isoelectric Point: 7.3843

>NTDB_id=280326 C4J83_RS28375 WP_106575669.1 6103195..6103602(-) (pilG) [Pseudomonas sp. LBUM920]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=280326 C4J83_RS28375 WP_106575669.1 6103195..6103602(-) (pilG) [Pseudomonas sp. LBUM920]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACCCTGTT
GAAGAACGTGGGGTGCGAAGTCATCACGGCCATCGACGGTTTCGATGCACTGGCCCGGATTGTTGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAAACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATTCCGGTGATCATGTTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGCGCGATCAAGGCCTACGTGCCCGGCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7M1KEX5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659

Multiple sequence alignment