Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   D9C08_RS22440 Genome accession   NZ_CP032872
Coordinates   4187367..4188080 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain 2KL1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4182367..4193080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C08_RS22420 (D9C08_22420) ghrB 4182512..4183489 (+) 978 WP_072592561.1 D-glycerate dehydrogenase -
  D9C08_RS22425 (D9C08_22425) psdB 4183526..4185466 (-) 1941 WP_069837800.1 lantibiotic ABC transporter permease PsdB -
  D9C08_RS22430 (D9C08_22430) psdA 4185441..4186220 (-) 780 WP_069837801.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  D9C08_RS22435 (D9C08_22435) psdS 4186303..4187373 (-) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  D9C08_RS22440 (D9C08_22440) braR 4187367..4188080 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  D9C08_RS22445 (D9C08_22445) - 4188227..4188435 (+) 209 Protein_4336 hypothetical protein -
  D9C08_RS22450 (D9C08_22450) yvcN 4188471..4189235 (-) 765 WP_080480876.1 arylamine N-acetyltransferase -
  D9C08_RS22455 (D9C08_22455) crh 4189236..4189493 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  D9C08_RS22460 (D9C08_22460) whiA 4189517..4190467 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  D9C08_RS22465 (D9C08_22465) mgfK 4190490..4191443 (-) 954 WP_069837939.1 gluconeogenesis morphogenetic factor -
  D9C08_RS22470 (D9C08_22470) rapZ 4191445..4192332 (-) 888 WP_003243903.1 RNase adapter RapZ -
  D9C08_RS22475 (D9C08_22475) rppI 4192357..4192833 (-) 477 WP_014481002.1 NUDIX domain-containing protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=280306 D9C08_RS22440 WP_014481000.1 4187367..4188080(-) (braR) [Bacillus subtilis subsp. subtilis strain 2KL1]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=280306 D9C08_RS22440 WP_014481000.1 4187367..4188080(-) (braR) [Bacillus subtilis subsp. subtilis strain 2KL1]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435