Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   D9C08_RS19460 Genome accession   NZ_CP032872
Coordinates   3639571..3640266 (-) Length   231 a.a.
NCBI ID   WP_069837705.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain 2KL1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3634571..3645266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C08_RS19440 (D9C08_19440) yttA 3634998..3635744 (+) 747 Protein_3757 LMBR1 domain-containing protein -
  D9C08_RS19445 (D9C08_19445) bceB 3635781..3637721 (-) 1941 WP_069837704.1 bacitracin ABC transporter permease BceB -
  D9C08_RS19450 (D9C08_19450) bceA 3637711..3638472 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  D9C08_RS19455 (D9C08_19455) bceS 3638574..3639578 (-) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  D9C08_RS19460 (D9C08_19460) braR 3639571..3640266 (-) 696 WP_069837705.1 two-component response regulator BceR Regulator
  D9C08_RS19465 (D9C08_19465) ytrF 3640363..3641673 (-) 1311 WP_069837706.1 ABC transporter permease YtrF -
  D9C08_RS19470 (D9C08_19470) ytrE 3641663..3642358 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  D9C08_RS19475 (D9C08_19475) ytrD 3642373..3643350 (-) 978 WP_014480623.1 ABC transporter permease YtrD -
  D9C08_RS19480 (D9C08_19480) - 3643382..3644368 (-) 987 WP_069837707.1 ABC transporter permease subunit -
  D9C08_RS19485 (D9C08_19485) ytrB 3644362..3645240 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26909.77 Da        Isoelectric Point: 5.3731

>NTDB_id=280295 D9C08_RS19460 WP_069837705.1 3639571..3640266(-) (braR) [Bacillus subtilis subsp. subtilis strain 2KL1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFSAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=280295 D9C08_RS19460 WP_069837705.1 3639571..3640266(-) (braR) [Bacillus subtilis subsp. subtilis strain 2KL1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTTCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTACACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAAGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377