Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4J85_RS25545 Genome accession   NZ_CP027760
Coordinates   5532745..5533152 (-) Length   135 a.a.
NCBI ID   WP_124364796.1    Uniprot ID   -
Organism   Pseudomonas sp. R4-34-07     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5527745..5538152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4J85_RS25530 (C4J85_5113) - 5529748..5531799 (-) 2052 WP_124410989.1 methyl-accepting chemotaxis protein -
  C4J85_RS25535 (C4J85_5114) - 5531796..5532320 (-) 525 WP_124410990.1 chemotaxis protein CheW -
  C4J85_RS25540 (C4J85_5115) pilH 5532333..5532698 (-) 366 WP_034116227.1 twitching motility response regulator PilH -
  C4J85_RS25545 (C4J85_5116) pilG 5532745..5533152 (-) 408 WP_124364796.1 twitching motility response regulator PilG Regulator
  C4J85_RS25550 (C4J85_5117) gshB 5533392..5534345 (+) 954 WP_124372162.1 glutathione synthase -
  C4J85_RS25555 (C4J85_5118) - 5534423..5535328 (+) 906 WP_124368685.1 energy transducer TonB -
  C4J85_RS25565 (C4J85_5119) - 5535517..5536086 (+) 570 WP_124368687.1 YqgE/AlgH family protein -
  C4J85_RS25570 (C4J85_5120) ruvX 5536086..5536523 (+) 438 WP_124410991.1 Holliday junction resolvase RuvX -
  C4J85_RS25575 (C4J85_5121) pyrR 5536671..5537177 (+) 507 WP_124368688.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14966.52 Da        Isoelectric Point: 7.3843

>NTDB_id=280278 C4J85_RS25545 WP_124364796.1 5532745..5533152(-) (pilG) [Pseudomonas sp. R4-34-07]
MEQHSNALRVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=280278 C4J85_RS25545 WP_124364796.1 5532745..5533152(-) (pilG) [Pseudomonas sp. R4-34-07]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCCATCGACGGTTTCGATGCGCTGGCCCGAATCGTGGACCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCGATCAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.079

94.074

0.659

Multiple sequence alignment