Detailed information NTG0280201

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: D9C08_RS07485
• Genome accession: NZ_CP032872
• Coordinates: 1433095..1434222 (-)
• Length: 375 a.a.
• NCBI ID: WP_052728183.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain 2KL1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1428095..1439222

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C08_RS07465 (D9C08_07465)	-	1430057..1430659 (+)	603	WP_046380830.1	hypothetical protein	-
D9C08_RS07470 (D9C08_07470)	-	1430659..1432530 (+)	1872	WP_046380831.1	hypothetical protein	-
D9C08_RS24155 (D9C08_07475)	-	1432631..1432789 (-)	159	WP_121509446.1	YgjP-like metallopeptidase domain-containing protein	-
D9C08_RS07480 (D9C08_07480)	-	1432908..1433105 (-)	198	WP_003240078.1	hypothetical protein	-
D9C08_RS07485 (D9C08_07485)	rapC	1433095..1434222 (-)	1128	WP_052728183.1	tetratricopeptide repeat protein	Regulator
D9C08_RS07490 (D9C08_07490)	-	1434411..1434647 (-)	237	Protein_1405	hypothetical protein	-
D9C08_RS07495 (D9C08_07495)	-	1434797..1435189 (-)	393	WP_046380833.1	hypothetical protein	-
D9C08_RS07500 (D9C08_07500)	-	1435522..1435992 (-)	471	WP_046380834.1	antitoxin YezG family protein	-
D9C08_RS07505 (D9C08_07505)	yeeF	1435997..1438003 (-)	2007	WP_046380835.1	LXG family T7SS effector deoxyribonuclease toxin YeeF	-
D9C08_RS07510 (D9C08_07510)	-	1438170..1438508 (+)	339	WP_069837346.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44492.19 Da
• Isoelectric Point: 6.6870

>NTDB_id=280201 D9C08_RS07485 WP_052728183.1 1433095..1434222(-) (rapC) [Bacillus subtilis subsp. subtilis strain 2KL1]
MGTISSPHVGMKINEWNRHIQKFNVTDAEMLKAEIERDIDIMEEDQDLLIYYQLIAFRHQLMIDYVIPTEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEKSIFQFKKSNFNNLTQAYHDLALIYFLQHKQEQAMDCFRKGVRFACKFDDDLFKIMFEGLQTLFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=280201 D9C08_RS07485 WP_052728183.1 1433095..1434222(-) (rapC) [Bacillus subtilis subsp. subtilis strain 2KL1]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATGAAAATTAATGAGTGGAACCGGCATATTCAAAAGTTTAATGTGACTGA
CGCTGAAATGCTTAAAGCTGAGATCGAACGGGACATTGACATCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCTACTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAGCTCGTTGAATACTACTATTACTTTTTTCAAGGAATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAACACAATTCCCTATATTTCAGATGAAATTG
AGCGGGCGGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACGCACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTGATCGCAGGAAACTA
CGATGACCTAGAAAGTCATGAAAAGGCGCTCCCTCACCTCGAACAGGCACTAAAAGGCGCACGGCTGCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGAGAATTGACGAAAGCAGCAAAA
TACATGGAGAAATCGATATTCCAATTTAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGAACAGGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGATGATG
ACCTATTTAAAATTATGTTTGAAGGATTGCAGACGCTGTTTATCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (259-286)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

• Tetratricopeptide repeat (TPR_12) (187-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.421
rapF	Bacillus subtilis subsp. subtilis str. 168	38.786	100	0.392