Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   D9C08_RS03050 Genome accession   NZ_CP032872
Coordinates   588032..588826 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis subsp. subtilis strain 2KL1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 583032..593826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C08_RS03015 (D9C08_03015) - 583164..583574 (-) 411 WP_231560755.1 SdpA family antimicrobial peptide system protein -
  D9C08_RS03020 (D9C08_03020) - 583902..584537 (-) 636 WP_014481470.1 SdpI family protein -
  D9C08_RS03025 (D9C08_03025) - 584537..584821 (-) 285 WP_015715052.1 autorepressor SdpR family transcription factor -
  D9C08_RS03030 (D9C08_03030) rocR 585048..586433 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  D9C08_RS03035 (D9C08_03035) - 586415..586567 (-) 153 Protein_597 ATP-binding protein -
  D9C08_RS03040 (D9C08_03040) - 586595..586727 (-) 133 Protein_598 hypothetical protein -
  D9C08_RS03045 (D9C08_03045) htrA 586748..587950 (-) 1203 WP_046161071.1 serine protease HtrC Regulator
  D9C08_RS03050 (D9C08_03050) vicX 588032..588826 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  D9C08_RS03055 (D9C08_03055) walI 588848..589690 (-) 843 WP_014481473.1 WalRK two-component regulatory system regulator WalI -
  D9C08_RS03060 (D9C08_03060) walH 589677..591044 (-) 1368 WP_069837942.1 WalRK two-component regulatory system regulator WalH -
  D9C08_RS03065 (D9C08_03065) walK 591034..592869 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  D9C08_RS03070 (D9C08_03070) walR 592877..593584 (-) 708 WP_069837943.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=280174 D9C08_RS03050 WP_003226939.1 588032..588826(-) (vicX) [Bacillus subtilis subsp. subtilis strain 2KL1]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=280174 D9C08_RS03050 WP_003226939.1 588032..588826(-) (vicX) [Bacillus subtilis subsp. subtilis strain 2KL1]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTTGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTGGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGGAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAAAC
AGTGAAGTCGTTCGGCGGACTTGATGTTGAATCATTTGGCGTTTCCCACGATGCGGCCGAGCCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGAAGATACCCGTGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53