Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4K02_RS27585 Genome accession   NZ_CP027755
Coordinates   6054923..6055330 (-) Length   135 a.a.
NCBI ID   WP_043046275.1    Uniprot ID   A0A0D0RY13
Organism   Pseudomonas synxantha strain 2-79     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6049923..6060330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4K02_RS27570 (C4K02_5545) - 6051927..6053978 (-) 2052 WP_043046270.1 methyl-accepting chemotaxis protein -
  C4K02_RS27575 (C4K02_5546) - 6053975..6054499 (-) 525 WP_043046272.1 chemotaxis protein CheW -
  C4K02_RS27580 (C4K02_5547) pilH 6054511..6054876 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  C4K02_RS27585 (C4K02_5548) pilG 6054923..6055330 (-) 408 WP_043046275.1 twitching motility response regulator PilG Regulator
  C4K02_RS27590 (C4K02_5549) gshB 6055570..6056523 (+) 954 WP_043046278.1 glutathione synthase -
  C4K02_RS27595 (C4K02_5550) - 6056601..6057506 (+) 906 WP_043046280.1 energy transducer TonB -
  C4K02_RS27600 (C4K02_5551) - 6057722..6058291 (+) 570 WP_043046282.1 YqgE/AlgH family protein -
  C4K02_RS27605 (C4K02_5552) ruvX 6058291..6058728 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  C4K02_RS27610 (C4K02_5553) pyrR 6058877..6059383 (+) 507 WP_043046285.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 15013.57 Da        Isoelectric Point: 7.3843

>NTDB_id=280157 C4K02_RS27585 WP_043046275.1 6054923..6055330(-) (pilG) [Pseudomonas synxantha strain 2-79]
MEQHSSALRVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPTFK
TIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPAFATVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=280157 C4K02_RS27585 WP_043046275.1 6054923..6055330(-) (pilG) [Pseudomonas synxantha strain 2-79]
ATGGAACAGCATTCCAGCGCCTTGAGGGTAATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACCCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCGCGGATTGTGGATCATCACCCGCACA
TTATTTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAATCCGACGTTCAAG
ACGATCCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCGATCAAGGCCTATGTGCCTGCCTTCGCCACAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D0RY13

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.079

94.074

0.659

Multiple sequence alignment