Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4K03_RS29650 Genome accession   NZ_CP027754
Coordinates   6363837..6364244 (-) Length   135 a.a.
NCBI ID   WP_124379793.1    Uniprot ID   A0A3G7UEZ9
Organism   Pseudomonas synxantha strain 30B     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6358837..6369244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4K03_RS29635 (C4K03_5905) - 6360841..6362892 (-) 2052 WP_124379791.1 methyl-accepting chemotaxis protein -
  C4K03_RS29640 (C4K03_5906) - 6362889..6363413 (-) 525 WP_124379792.1 chemotaxis protein CheW -
  C4K03_RS29645 (C4K03_5907) pilH 6363425..6363790 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  C4K03_RS29650 (C4K03_5908) pilG 6363837..6364244 (-) 408 WP_124379793.1 twitching motility response regulator PilG Regulator
  C4K03_RS29655 (C4K03_5909) gshB 6364484..6365437 (+) 954 WP_124379794.1 glutathione synthase -
  C4K03_RS29660 (C4K03_5910) - 6365515..6366420 (+) 906 WP_043046280.1 energy transducer TonB -
  C4K03_RS29665 (C4K03_5911) - 6366572..6367141 (+) 570 WP_124379795.1 YqgE/AlgH family protein -
  C4K03_RS29670 (C4K03_5912) ruvX 6367141..6367578 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  C4K03_RS29675 (C4K03_5913) pyrR 6367726..6368232 (+) 507 WP_124379796.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14939.49 Da        Isoelectric Point: 7.3843

>NTDB_id=280132 C4K03_RS29650 WP_124379793.1 6363837..6364244(-) (pilG) [Pseudomonas synxantha strain 30B]
MEQHSSALRVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
ATPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGVIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=280132 C4K03_RS29650 WP_124379793.1 6363837..6364244(-) (pilG) [Pseudomonas synxantha strain 30B]
ATGGAACAGCATTCCAGCGCCTTGAGGGTAATGGTGATCGACGATTCGAAAACGATTCGCCGCACCGCCGAGACCCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCCATCGACGGTTTCGATGCCTTGGCGCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
GCGACCCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGTGATAAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3G7UEZ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

68.504

94.074

0.644

Multiple sequence alignment