Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   D9C20_RS03265 Genome accession   NZ_CP032867
Coordinates   615153..615848 (-) Length   231 a.a.
NCBI ID   WP_014480621.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain N4-2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 610153..620848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C20_RS03245 (D9C20_03245) yttA 610580..611326 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  D9C20_RS03250 (D9C20_03250) bceB 611363..613303 (-) 1941 WP_014480619.1 bacitracin ABC transporter permease BceB -
  D9C20_RS03255 (D9C20_03255) bceA 613293..614054 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  D9C20_RS03260 (D9C20_03260) bceS 614156..615160 (-) 1005 WP_014480620.1 two-component sensor histidine kinase BceS -
  D9C20_RS03265 (D9C20_03265) braR 615153..615848 (-) 696 WP_014480621.1 two-component response regulator BceR Regulator
  D9C20_RS03270 (D9C20_03270) ytrF 615945..617255 (-) 1311 WP_014480622.1 ABC transporter permease YtrF -
  D9C20_RS03275 (D9C20_03275) ytrE 617245..617940 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  D9C20_RS03280 (D9C20_03280) ytrD 617955..618932 (-) 978 WP_014480623.1 ABC transporter permease YtrD -
  D9C20_RS03285 (D9C20_03285) - 618964..619950 (-) 987 WP_014480624.1 ABC transporter permease subunit -
  D9C20_RS03290 (D9C20_03290) ytrB 619944..620822 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26908.74 Da        Isoelectric Point: 5.3731

>NTDB_id=280043 D9C20_RS03265 WP_014480621.1 615153..615848(-) (braR) [Bacillus subtilis subsp. subtilis strain N4-2]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=280043 D9C20_RS03265 WP_014480621.1 615153..615848(-) (braR) [Bacillus subtilis subsp. subtilis strain N4-2]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment