Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | D9C18_RS18905 | Genome accession | NZ_CP032865 |
| Coordinates | 3553617..3554027 (+) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | P42983 |
| Organism | Bacillus subtilis subsp. subtilis strain N3-1 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 3548617..3559027
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C18_RS18880 (D9C18_18880) | - | 3549722..3550612 (-) | 891 | WP_014480326.1 | LysR family transcriptional regulator | - |
| D9C18_RS18885 (D9C18_18885) | fumC | 3550779..3552167 (+) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
| D9C18_RS23120 | - | 3552386..3552598 (+) | 213 | Protein_3643 | recombinase family protein | - |
| D9C18_RS18895 (D9C18_18895) | - | 3552595..3552693 (-) | 99 | WP_031600702.1 | hypothetical protein | - |
| D9C18_RS18900 (D9C18_18900) | sigK | 3552693..3553421 (-) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| D9C18_RS18905 (D9C18_18905) | nucA/comI | 3553617..3554027 (+) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| D9C18_RS18910 (D9C18_18910) | yqeB | 3554060..3554782 (-) | 723 | WP_014480321.1 | hypothetical protein | - |
| D9C18_RS18915 (D9C18_18915) | gnd | 3555033..3555926 (+) | 894 | WP_014480320.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| D9C18_RS18920 (D9C18_18920) | yqeD | 3555945..3556571 (-) | 627 | WP_014480319.1 | TVP38/TMEM64 family protein | - |
| D9C18_RS18925 (D9C18_18925) | cwlH | 3556758..3557510 (+) | 753 | WP_014480318.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| D9C18_RS18930 (D9C18_18930) | yqeF | 3557762..3558493 (+) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| D9C18_RS18935 (D9C18_18935) | - | 3558799..3558939 (-) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=279983 D9C18_RS18905 WP_009967785.1 3553617..3554027(+) (nucA/comI) [Bacillus subtilis subsp. subtilis strain N3-1]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=279983 D9C18_RS18905 WP_009967785.1 3553617..3554027(+) (nucA/comI) [Bacillus subtilis subsp. subtilis strain N3-1]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |