Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   D9C18_RS16765 Genome accession   NZ_CP032865
Coordinates   3133693..3134388 (+) Length   231 a.a.
NCBI ID   WP_014480621.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain N3-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3128693..3139388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C18_RS16740 (D9C18_16740) ytrB 3128719..3129597 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  D9C18_RS16745 (D9C18_16745) - 3129591..3130577 (+) 987 WP_014480624.1 ABC transporter permease subunit -
  D9C18_RS16750 (D9C18_16750) ytrD 3130609..3131586 (+) 978 WP_014480623.1 ABC transporter permease YtrD -
  D9C18_RS16755 (D9C18_16755) ytrE 3131601..3132296 (+) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  D9C18_RS16760 (D9C18_16760) ytrF 3132286..3133596 (+) 1311 WP_014480622.1 ABC transporter permease YtrF -
  D9C18_RS16765 (D9C18_16765) braR 3133693..3134388 (+) 696 WP_014480621.1 two-component response regulator BceR Regulator
  D9C18_RS16770 (D9C18_16770) bceS 3134381..3135385 (+) 1005 WP_014480620.1 two-component sensor histidine kinase BceS -
  D9C18_RS16775 (D9C18_16775) bceA 3135487..3136248 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  D9C18_RS16780 (D9C18_16780) bceB 3136238..3138178 (+) 1941 WP_014480619.1 bacitracin ABC transporter permease BceB -
  D9C18_RS16785 (D9C18_16785) yttA 3138215..3138961 (-) 747 WP_014480618.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26908.74 Da        Isoelectric Point: 5.3731

>NTDB_id=279965 D9C18_RS16765 WP_014480621.1 3133693..3134388(+) (braR) [Bacillus subtilis subsp. subtilis strain N3-1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=279965 D9C18_RS16765 WP_014480621.1 3133693..3134388(+) (braR) [Bacillus subtilis subsp. subtilis strain N3-1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment