Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   D9C18_RS09930 Genome accession   NZ_CP032865
Coordinates   1860130..1860957 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis subsp. subtilis strain N3-1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1855130..1865957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C18_RS09905 (D9C18_09905) abrB 1857476..1857766 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  D9C18_RS09910 (D9C18_09910) rsmI 1857815..1858693 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  D9C18_RS09915 (D9C18_09915) yazA 1858668..1858967 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  D9C18_RS09920 (D9C18_09920) trmNF 1858954..1859697 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  D9C18_RS09925 (D9C18_09925) yabA 1859756..1860115 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  D9C18_RS09930 (D9C18_09930) yaaT 1860130..1860957 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  D9C18_RS09935 (D9C18_09935) holB 1860960..1861949 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  D9C18_RS09940 (D9C18_09940) yaaR 1861961..1862401 (-) 441 WP_009966249.1 YaaR family protein -
  D9C18_RS09945 (D9C18_09945) darA 1862414..1862743 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  D9C18_RS09950 (D9C18_09950) tmk 1862817..1863455 (-) 639 WP_003226776.1 dTMP kinase -
  D9C18_RS09955 (D9C18_09955) efpO 1863452..1864894 (-) 1443 WP_014478592.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=279930 D9C18_RS09930 WP_003226767.1 1860130..1860957(-) (yaaT) [Bacillus subtilis subsp. subtilis strain N3-1]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=279930 D9C18_RS09930 WP_003226767.1 1860130..1860957(-) (yaaT) [Bacillus subtilis subsp. subtilis strain N3-1]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996