Detailed information NTG0027983

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PST_RS19870
• Genome accession: NC_009434
• Coordinates: 4329346..4330620 (-)
• Length: 424 a.a.
• NCBI ID: WP_041755831.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri A1501
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4324346..4335620

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PST_RS19855 (PST_3989)	rpoH	4326695..4327549 (-)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-
PST_RS19860 (PST_3990)	ftsX	4327662..4328681 (-)	1020	WP_011914995.1	permease-like cell division protein FtsX	-
PST_RS19865 (PST_3991)	ftsE	4328681..4329349 (-)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
PST_RS19870 (PST_3992)	pilA	4329346..4330620 (-)	1275	WP_041755831.1	signal recognition particle-docking protein FtsY	Machinery gene
PST_RS19875 (PST_3993)	-	4330848..4332200 (+)	1353	WP_011914998.1	M16 family metallopeptidase	-
PST_RS19880 (PST_3994)	-	4332193..4333734 (+)	1542	WP_041755832.1	M16 family metallopeptidase	-
PST_RS19885 (PST_3995)	rsmD	4333734..4334351 (+)	618	WP_011915000.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PST_RS19890 (PST_3997)	-	4334345..4334749 (-)	405	WP_026006467.1	hypothetical protein	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 45232.47 Da
• Isoelectric Point: 4.6538

>NTDB_id=27983 PST_RS19870 WP_041755831.1 4329346..4330620(-) (pilA) [Stutzerimonas stutzeri A1501]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANVETPAATPQHEEPRAVEADLQPTEVIE
SPLPDPVPEPEPEPEPEPEPVSAPVVAATPEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETRLL
TADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDASKRPYVILVVGVNGVGKTTTIGKLAK
KLQLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLME
ELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGVGE
GIDDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1275 bp

>NTDB_id=27983 PST_RS19870 WP_041755831.1 4329346..4330620(-) (pilA) [Stutzerimonas stutzeri A1501]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCCCAGCCCGCTTCGGCAGAGCAGCCCGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATG
TCGAAACGCCTGCCGCCACGCCGCAGCACGAGGAGCCTCGCGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCGAG
TCGCCGCTGCCAGACCCTGTACCCGAACCCGAACCCGAACCCGAACCAGAGCCCGAGCCGGTATCTGCCCCGGTCGTTGC
GGCCACGCCGGAAGCGCCGGCCAAGCTCGGCTTTTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCAGCGCCAGCATCG
GCGAAGGCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAACTGGAAACCCGCCTGCTG
ACCGCCGACGTCGGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAAGGAGCTGGCCGA
CAGCGGCGCGCTCTACACGGCGCTGCAGGAGGAGCTCGTCGGCCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGATCGATG
CCAGCAAGCGTCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTCGCCAAG
AAACTGCAACTCGACGGCAAGAAAGTCATGCTCGCCGCCGGTGACACCTTCCGCGCCGCAGCGGTGGAGCAGCTGCAGGT
CTGGGGCGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCTTCGATGCCGTGC
AGGCCGCCAAGGCACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGCCTGCACACCAAGGACAACCTGATGGAA
GAGTTGAAGAAGGTCCGCCGGGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGTGCTCGATGCCGG
TACCGGACAGAACGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGCTGACCAAGCTCG
ACGGCACCGCCAAGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTAGGCGAA
GGTATCGACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCTCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (134-199)

• SRP54-type protein, GTPase domain (SRP54) (219-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50	98.585	0.493