Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   D9C17_RS05755 Genome accession   NZ_CP032863
Coordinates   1041950..1042645 (-) Length   231 a.a.
NCBI ID   WP_014480621.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain N2-2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1036950..1047645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C17_RS05735 (D9C17_05735) yttA 1037377..1038123 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  D9C17_RS05740 (D9C17_05740) bceB 1038160..1040100 (-) 1941 WP_014480619.1 bacitracin ABC transporter permease BceB -
  D9C17_RS05745 (D9C17_05745) bceA 1040090..1040851 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  D9C17_RS05750 (D9C17_05750) bceS 1040953..1041957 (-) 1005 WP_014480620.1 two-component sensor histidine kinase BceS -
  D9C17_RS05755 (D9C17_05755) braR 1041950..1042645 (-) 696 WP_014480621.1 two-component response regulator BceR Regulator
  D9C17_RS05760 (D9C17_05760) ytrF 1042742..1044052 (-) 1311 WP_014480622.1 ABC transporter permease YtrF -
  D9C17_RS05765 (D9C17_05765) ytrE 1044042..1044737 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  D9C17_RS05770 (D9C17_05770) ytrD 1044752..1045729 (-) 978 WP_014480623.1 ABC transporter permease YtrD -
  D9C17_RS05775 (D9C17_05775) - 1045761..1046747 (-) 987 WP_014480624.1 ABC transporter permease subunit -
  D9C17_RS05780 (D9C17_05780) ytrB 1046741..1047619 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26908.74 Da        Isoelectric Point: 5.3731

>NTDB_id=279751 D9C17_RS05755 WP_014480621.1 1041950..1042645(-) (braR) [Bacillus subtilis subsp. subtilis strain N2-2]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=279751 D9C17_RS05755 WP_014480621.1 1041950..1042645(-) (braR) [Bacillus subtilis subsp. subtilis strain N2-2]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment