Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   D9C17_RS00375 Genome accession   NZ_CP032863
Coordinates   59184..59801 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis strain N2-2     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 54184..64801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C17_RS00345 (D9C17_00345) yndJ 54503..56143 (+) 1641 WP_014479931.1 YndJ family protein -
  D9C17_RS00350 (D9C17_00350) - 56233..56547 (+) 315 Protein_69 hypothetical protein -
  D9C17_RS00355 (D9C17_00355) pghL 56772..57530 (+) 759 WP_014479934.1 gamma-polyglutamate hydrolase PghL -
  D9C17_RS00360 (D9C17_00360) - 57557..58006 (-) 450 WP_014479935.1 YndM family protein -
  D9C17_RS00365 (D9C17_00365) fosM 58215..58634 (+) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  D9C17_RS22850 - 58558..58897 (+) 340 Protein_73 hypothetical protein -
  D9C17_RS00375 (D9C17_00375) dinR/lexA 59184..59801 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  D9C17_RS00380 (D9C17_00380) yneA 59951..60268 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  D9C17_RS00385 (D9C17_00385) dinL 60287..60940 (+) 654 WP_014479938.1 recombinase family protein -
  D9C17_RS00390 (D9C17_00390) ynzC 61004..61237 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  D9C17_RS00395 (D9C17_00395) recP/tkt 61406..63409 (+) 2004 WP_014476936.1 transketolase Machinery gene
  D9C17_RS00400 (D9C17_00400) sirA 63562..64008 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  D9C17_RS00405 (D9C17_00405) yneF 64094..64312 (+) 219 WP_003221221.1 YneF family protein -
  D9C17_RS00410 (D9C17_00410) ynzD 64386..64559 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=279709 D9C17_RS00375 WP_003238209.1 59184..59801(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain N2-2]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=279709 D9C17_RS00375 WP_003238209.1 59184..59801(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain N2-2]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCAATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment