Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4J90_RS24975 Genome accession   NZ_CP027731
Coordinates   5451300..5451707 (-) Length   135 a.a.
NCBI ID   WP_124364796.1    Uniprot ID   -
Organism   Pseudomonas sp. R2-60-08W     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5446300..5456707
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4J90_RS24960 (C4J90_5024) - 5448303..5450354 (-) 2052 WP_124364794.1 methyl-accepting chemotaxis protein -
  C4J90_RS24965 (C4J90_5025) - 5450351..5450875 (-) 525 WP_124364795.1 chemotaxis protein CheW -
  C4J90_RS24970 (C4J90_5026) pilH 5450888..5451253 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  C4J90_RS24975 (C4J90_5027) pilG 5451300..5451707 (-) 408 WP_124364796.1 twitching motility response regulator PilG Regulator
  C4J90_RS24980 (C4J90_5028) gshB 5451947..5452900 (+) 954 WP_028618297.1 glutathione synthase -
  C4J90_RS24985 (C4J90_5029) - 5452978..5453883 (+) 906 WP_124421044.1 energy transducer TonB -
  C4J90_RS24995 (C4J90_5030) - 5454072..5454641 (+) 570 WP_124364798.1 YqgE/AlgH family protein -
  C4J90_RS25000 (C4J90_5031) ruvX 5454641..5455078 (+) 438 WP_124410991.1 Holliday junction resolvase RuvX -
  C4J90_RS25005 (C4J90_5032) pyrR 5455211..5455717 (+) 507 WP_124364799.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14966.52 Da        Isoelectric Point: 7.3843

>NTDB_id=279586 C4J90_RS24975 WP_124364796.1 5451300..5451707(-) (pilG) [Pseudomonas sp. R2-60-08W]
MEQHSNALRVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=279586 C4J90_RS24975 WP_124364796.1 5451300..5451707(-) (pilG) [Pseudomonas sp. R2-60-08W]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCCATTGACGGTTTCGATGCCCTGGCCCGAATCGTGGACCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCGATCAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.079

94.074

0.659

Multiple sequence alignment