Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4J91_RS25630 Genome accession   NZ_CP027730
Coordinates   5544465..5544872 (-) Length   135 a.a.
NCBI ID   WP_124364796.1    Uniprot ID   -
Organism   Pseudomonas sp. R3-52-08     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5539465..5549872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4J91_RS25615 (C4J91_5143) - 5541468..5543519 (-) 2052 WP_124364794.1 methyl-accepting chemotaxis protein -
  C4J91_RS25620 (C4J91_5144) - 5543516..5544040 (-) 525 WP_124364795.1 chemotaxis protein CheW -
  C4J91_RS25625 (C4J91_5145) pilH 5544053..5544418 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  C4J91_RS25630 (C4J91_5146) pilG 5544465..5544872 (-) 408 WP_124364796.1 twitching motility response regulator PilG Regulator
  C4J91_RS25635 (C4J91_5147) gshB 5545112..5546065 (+) 954 WP_028618297.1 glutathione synthase -
  C4J91_RS25640 (C4J91_5148) - 5546143..5547048 (+) 906 WP_124364797.1 energy transducer TonB -
  C4J91_RS25650 (C4J91_5149) - 5547237..5547806 (+) 570 WP_124364798.1 YqgE/AlgH family protein -
  C4J91_RS25655 (C4J91_5150) ruvX 5547806..5548243 (+) 438 WP_003213744.1 Holliday junction resolvase RuvX -
  C4J91_RS25660 (C4J91_5151) pyrR 5548376..5548882 (+) 507 WP_124364799.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14966.52 Da        Isoelectric Point: 7.3843

>NTDB_id=279561 C4J91_RS25630 WP_124364796.1 5544465..5544872(-) (pilG) [Pseudomonas sp. R3-52-08]
MEQHSNALRVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=279561 C4J91_RS25630 WP_124364796.1 5544465..5544872(-) (pilG) [Pseudomonas sp. R3-52-08]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCCATTGACGGTTTCGATGCCCTGGCCCGAATCGTGGACCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCGATCAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.079

94.074

0.659

Multiple sequence alignment