Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   D9C14_RS18695 Genome accession   NZ_CP032860
Coordinates   3577735..3578352 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis strain SSJ-1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3572735..3583352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C14_RS18665 (D9C14_18665) yndJ 3573065..3574705 (+) 1641 WP_029726670.1 YndJ family protein -
  D9C14_RS18670 (D9C14_18670) - 3574783..3575097 (+) 315 WP_029726671.1 hypothetical protein -
  D9C14_RS18675 (D9C14_18675) pghL 3575322..3576080 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  D9C14_RS18680 (D9C14_18680) - 3576107..3576556 (-) 450 WP_003245454.1 YndM family protein -
  D9C14_RS18685 (D9C14_18685) fosM 3576764..3577198 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  D9C14_RS22500 - 3577107..3577383 (+) 277 Protein_3610 hypothetical protein -
  D9C14_RS18695 (D9C14_18695) dinR/lexA 3577735..3578352 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  D9C14_RS18700 (D9C14_18700) yneA 3578502..3578819 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  D9C14_RS18705 (D9C14_18705) dinL 3578838..3579491 (+) 654 WP_015714011.1 recombinase family protein -
  D9C14_RS18710 (D9C14_18710) ynzC 3579555..3579788 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  D9C14_RS18715 (D9C14_18715) recP/tkt 3579957..3581960 (+) 2004 WP_038427724.1 transketolase Machinery gene
  D9C14_RS18720 (D9C14_18720) sirA 3582113..3582559 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  D9C14_RS18725 (D9C14_18725) yneF 3582645..3582863 (+) 219 WP_003221221.1 YneF family protein -
  D9C14_RS18730 (D9C14_18730) ynzD 3582937..3583110 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=279535 D9C14_RS18695 WP_003238209.1 3577735..3578352(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=279535 D9C14_RS18695 WP_003238209.1 3577735..3578352(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain SSJ-1]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GACTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment