Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4J94_RS25590 Genome accession   NZ_CP027727
Coordinates   5579056..5579463 (-) Length   135 a.a.
NCBI ID   WP_124388588.1    Uniprot ID   -
Organism   Pseudomonas sp. R5-89-07     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5574056..5584463
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4J94_RS25575 (C4J94_5124) - 5576059..5578110 (-) 2052 WP_124388586.1 methyl-accepting chemotaxis protein -
  C4J94_RS25580 (C4J94_5125) - 5578107..5578631 (-) 525 WP_124388587.1 chemotaxis protein CheW -
  C4J94_RS25585 (C4J94_5126) pilH 5578644..5579009 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  C4J94_RS25590 (C4J94_5127) pilG 5579056..5579463 (-) 408 WP_124388588.1 twitching motility response regulator PilG Regulator
  C4J94_RS25595 (C4J94_5128) gshB 5579703..5580656 (+) 954 WP_028618297.1 glutathione synthase -
  C4J94_RS25600 (C4J94_5129) - 5580734..5581639 (+) 906 WP_124388589.1 energy transducer TonB -
  C4J94_RS25605 (C4J94_5130) - 5581791..5582360 (+) 570 WP_124388590.1 YqgE/AlgH family protein -
  C4J94_RS25610 (C4J94_5131) ruvX 5582360..5582797 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  C4J94_RS25615 (C4J94_5132) pyrR 5582930..5583436 (+) 507 WP_124388591.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14996.54 Da        Isoelectric Point: 7.3843

>NTDB_id=279489 C4J94_RS25590 WP_124388588.1 5579056..5579463(-) (pilG) [Pseudomonas sp. R5-89-07]
MEQHSNALRVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=279489 C4J94_RS25590 WP_124388588.1 5579056..5579463(-) (pilG) [Pseudomonas sp. R5-89-07]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACATGGGGTGCGAGGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGAATCGTGGACCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTGGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGCGCGATCAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.079

94.074

0.659

Multiple sequence alignment