Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4J98_RS25130 Genome accession   NZ_CP027723
Coordinates   5511227..5511634 (-) Length   135 a.a.
NCBI ID   WP_065885361.1    Uniprot ID   -
Organism   Pseudomonas orientalis strain 8B     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5506227..5516634
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4J98_RS25115 (C4J98_4994) - 5508225..5510282 (-) 2058 WP_124434347.1 methyl-accepting chemotaxis protein -
  C4J98_RS25120 (C4J98_4995) - 5510279..5510803 (-) 525 WP_124434348.1 chemotaxis protein CheW -
  C4J98_RS25125 (C4J98_4996) pilH 5510816..5511181 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  C4J98_RS25130 (C4J98_4997) pilG 5511227..5511634 (-) 408 WP_065885361.1 twitching motility response regulator PilG Regulator
  C4J98_RS25135 (C4J98_4998) gshB 5511874..5512818 (+) 945 WP_124434349.1 glutathione synthase -
  C4J98_RS25140 (C4J98_4999) - 5512905..5513810 (+) 906 WP_124434350.1 energy transducer TonB -
  C4J98_RS25145 (C4J98_5000) - 5513986..5514555 (+) 570 WP_124434351.1 YqgE/AlgH family protein -
  C4J98_RS25150 (C4J98_5001) ruvX 5514555..5514992 (+) 438 WP_124434352.1 Holliday junction resolvase RuvX -
  C4J98_RS25155 (C4J98_5002) pyrR 5515151..5515657 (+) 507 WP_124434353.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14950.42 Da        Isoelectric Point: 7.3845

>NTDB_id=279393 C4J98_RS25130 WP_065885361.1 5511227..5511634(-) (pilG) [Pseudomonas orientalis strain 8B]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSRDGLFDKAKGRTVGVDQFLTKPFSKEELLGAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=279393 C4J98_RS25130 WP_065885361.1 5511227..5511634(-) (pilG) [Pseudomonas orientalis strain 8B]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACGTGGGGTGCGAGGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCCGAATCGTTGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCCCTGGTGAAGAACAACCCGGCATTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAGGGACGGCCTGTTCGACAAGGCCAAGGGGCGTACCGTGGGGGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCGATCAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.291

94.074

0.652

Multiple sequence alignment