Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   D9C12_RS17380 Genome accession   NZ_CP032857
Coordinates   3244386..3245081 (-) Length   231 a.a.
NCBI ID   WP_069837705.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain 2RL2-3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3239386..3250081
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C12_RS17360 (D9C12_17360) yttA 3239813..3240559 (+) 747 Protein_3351 LMBR1 domain-containing protein -
  D9C12_RS17365 (D9C12_17365) bceB 3240596..3242536 (-) 1941 WP_069837704.1 bacitracin ABC transporter permease BceB -
  D9C12_RS17370 (D9C12_17370) bceA 3242526..3243287 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  D9C12_RS17375 (D9C12_17375) bceS 3243389..3244393 (-) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  D9C12_RS17380 (D9C12_17380) braR 3244386..3245081 (-) 696 WP_069837705.1 two-component response regulator BceR Regulator
  D9C12_RS17385 (D9C12_17385) ytrF 3245178..3246488 (-) 1311 WP_069837706.1 ABC transporter permease YtrF -
  D9C12_RS17390 (D9C12_17390) ytrE 3246478..3247173 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  D9C12_RS17395 (D9C12_17395) ytrD 3247188..3248165 (-) 978 WP_014480623.1 ABC transporter permease YtrD -
  D9C12_RS17400 (D9C12_17400) - 3248197..3249183 (-) 987 WP_069837707.1 ABC transporter permease subunit -
  D9C12_RS17405 (D9C12_17405) ytrB 3249177..3250055 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26909.77 Da        Isoelectric Point: 5.3731

>NTDB_id=279387 D9C12_RS17380 WP_069837705.1 3244386..3245081(-) (braR) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFSAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=279387 D9C12_RS17380 WP_069837705.1 3244386..3245081(-) (braR) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTTCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTACACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAAGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377