Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   D9C11_RS22085 Genome accession   NZ_CP032855
Coordinates   4086017..4086634 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis strain PJ-7     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4081017..4091634
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C11_RS22055 (D9C11_22055) yndJ 4081344..4082984 (+) 1641 Protein_4275 YndJ family protein -
  D9C11_RS22060 (D9C11_22060) - 4083062..4083376 (+) 315 WP_026113726.1 hypothetical protein -
  D9C11_RS22065 (D9C11_22065) pghL 4083602..4084360 (+) 759 WP_121591883.1 gamma-polyglutamate hydrolase PghL -
  D9C11_RS22070 (D9C11_22070) - 4084387..4084836 (-) 450 WP_017697357.1 YndM family protein -
  D9C11_RS22075 (D9C11_22075) fosB 4085044..4085478 (+) 435 WP_121591884.1 metallothiol transferase FosB -
  D9C11_RS22085 (D9C11_22085) dinR/lexA 4086017..4086634 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  D9C11_RS22090 (D9C11_22090) yneA 4086784..4087101 (+) 318 WP_121591885.1 cell division suppressor protein YneA -
  D9C11_RS22095 (D9C11_22095) dinL 4087120..4087773 (+) 654 WP_015714011.1 recombinase family protein -
  D9C11_RS22100 (D9C11_22100) ynzC 4087837..4088070 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  D9C11_RS22105 (D9C11_22105) recP/tkt 4088239..4090242 (+) 2004 WP_014476936.1 transketolase Machinery gene
  D9C11_RS22110 (D9C11_22110) sirA 4090395..4090841 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  D9C11_RS22115 (D9C11_22115) yneF 4090927..4091145 (+) 219 WP_003221221.1 YneF family protein -
  D9C11_RS22120 (D9C11_22120) ynzD 4091219..4091392 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=279259 D9C11_RS22085 WP_003238209.1 4086017..4086634(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain PJ-7]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=279259 D9C11_RS22085 WP_003238209.1 4086017..4086634(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain PJ-7]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTAGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGCATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1