Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   D9C11_RS04900 Genome accession   NZ_CP032855
Coordinates   880223..880918 (-) Length   231 a.a.
NCBI ID   WP_121591967.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain PJ-7     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 875223..885918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C11_RS04875 (D9C11_04875) - 875285..876532 (-) 1248 WP_031600262.1 IS256-like element ISBsu2 family transposase -
  D9C11_RS04885 (D9C11_04885) bceB 876608..878373 (-) 1766 Protein_966 bacitracin ABC transporter permease BceB -
  D9C11_RS04890 (D9C11_04890) bceA 878363..879124 (-) 762 WP_041054082.1 bacitracin ABC transporter ATP-binding protein BceA -
  D9C11_RS04895 (D9C11_04895) bceS 879226..880230 (-) 1005 WP_121591074.1 two-component sensor histidine kinase BceS -
  D9C11_RS04900 (D9C11_04900) braR 880223..880918 (-) 696 WP_121591967.1 two-component response regulator BceR Regulator
  D9C11_RS04905 (D9C11_04905) ytrF 881015..882325 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  D9C11_RS04910 (D9C11_04910) ytrE 882315..883010 (-) 696 WP_047183063.1 ABC transporter ATP-binding protein YtrE -
  D9C11_RS04915 (D9C11_04915) ytrD 883025..884002 (-) 978 WP_121591075.1 ABC transporter permease YtrD -
  D9C11_RS04920 (D9C11_04920) - 884034..885020 (-) 987 WP_121591076.1 ABC transporter permease subunit -
  D9C11_RS04925 (D9C11_04925) ytrB 885014..885892 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26896.82 Da        Isoelectric Point: 5.9561

>NTDB_id=279151 D9C11_RS04900 WP_121591967.1 880223..880918(-) (braR) [Bacillus subtilis subsp. subtilis strain PJ-7]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTKSNTIKTWCGAALDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=279151 D9C11_RS04900 WP_121591967.1 880223..880918(-) (braR) [Bacillus subtilis subsp. subtilis strain PJ-7]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGAAGTCGAATACGATTAAAACGTGGTGCG
GCGCTGCTTTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTAGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40

95.238

0.381