Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   D9C10_RS16535 Genome accession   NZ_CP032853
Coordinates   3031158..3031871 (-) Length   237 a.a.
NCBI ID   WP_121549135.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain MH-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3026158..3036871
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C10_RS16515 (D9C10_16515) ghrB 3026303..3027280 (+) 978 WP_072592561.1 D-glycerate dehydrogenase -
  D9C10_RS16520 (D9C10_16520) psdB 3027317..3029257 (-) 1941 WP_014480997.1 lantibiotic ABC transporter permease PsdB -
  D9C10_RS16525 (D9C10_16525) psdA 3029232..3030011 (-) 780 WP_069837801.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  D9C10_RS16530 (D9C10_16530) psdS 3030094..3031164 (-) 1071 WP_121549133.1 two-component sensor histidine kinase PsdS -
  D9C10_RS16535 (D9C10_16535) braR 3031158..3031871 (-) 714 WP_121549135.1 two-component system response regulator PsdR Regulator
  D9C10_RS16540 (D9C10_16540) - 3032018..3032227 (+) 210 WP_041055143.1 hypothetical protein -
  D9C10_RS16545 (D9C10_16545) yvcN 3032263..3033027 (-) 765 WP_121549137.1 arylamine N-acetyltransferase -
  D9C10_RS16550 (D9C10_16550) crh 3033028..3033285 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  D9C10_RS16555 (D9C10_16555) whiA 3033309..3034259 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  D9C10_RS16560 (D9C10_16560) mgfK 3034282..3035235 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  D9C10_RS16565 (D9C10_16565) rapZ 3035237..3036124 (-) 888 WP_121549139.1 RNase adapter RapZ -
  D9C10_RS16570 (D9C10_16570) rppI 3036149..3036625 (-) 477 WP_014481002.1 NUDIX domain-containing protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=279072 D9C10_RS16535 WP_121549135.1 3031158..3031871(-) (braR) [Bacillus subtilis subsp. subtilis strain MH-1]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=279072 D9C10_RS16535 WP_121549135.1 3031158..3031871(-) (braR) [Bacillus subtilis subsp. subtilis strain MH-1]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ATCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435