Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   D9C10_RS14345 Genome accession   NZ_CP032853
Coordinates   2620163..2621026 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis subsp. subtilis strain MH-1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 2615163..2626026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C10_RS14310 (D9C10_14310) mrpE 2615331..2615807 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  D9C10_RS14315 (D9C10_14315) mrpF 2615807..2616091 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  D9C10_RS14320 (D9C10_14320) mnhG 2616075..2616449 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  D9C10_RS14325 (D9C10_14325) yuxO 2616488..2616868 (-) 381 WP_069837723.1 hotdog fold thioesterase -
  D9C10_RS14330 (D9C10_14330) comA 2616887..2617531 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  D9C10_RS14335 (D9C10_14335) comP 2617612..2619924 (-) 2313 WP_103330147.1 sensor histidine kinase Regulator
  D9C10_RS14340 (D9C10_14340) comX 2619940..2620161 (-) 222 WP_014480704.1 competence pheromone ComX -
  D9C10_RS14345 (D9C10_14345) comQ 2620163..2621026 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  D9C10_RS14350 (D9C10_14350) degQ 2621211..2621351 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  D9C10_RS14355 (D9C10_14355) - 2621573..2621698 (+) 126 WP_121549029.1 hypothetical protein -
  D9C10_RS14360 (D9C10_14360) - 2621813..2622181 (+) 369 WP_046381300.1 hypothetical protein -
  D9C10_RS14365 (D9C10_14365) pdeH 2622157..2623386 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  D9C10_RS14370 (D9C10_14370) pncB 2623522..2624994 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  D9C10_RS14375 (D9C10_14375) pncA 2625010..2625561 (-) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=279064 D9C10_RS14345 WP_014480705.1 2620163..2621026(-) (comQ) [Bacillus subtilis subsp. subtilis strain MH-1]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=279064 D9C10_RS14345 WP_014480705.1 2620163..2621026(-) (comQ) [Bacillus subtilis subsp. subtilis strain MH-1]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439