Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   D9C10_RS01755 Genome accession   NZ_CP032853
Coordinates   315255..316385 (+) Length   376 a.a.
NCBI ID   WP_014479091.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain MH-1     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 310255..321385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C10_RS01735 (D9C10_01735) yeeF 310344..312353 (-) 2010 WP_121548732.1 LXG family T7SS effector deoxyribonuclease toxin YeeF -
  D9C10_RS01740 (D9C10_01740) - 312519..312857 (+) 339 WP_024571793.1 hypothetical protein -
  D9C10_RS01745 (D9C10_01745) - 312870..313790 (+) 921 WP_024571794.1 DUF5655 domain-containing protein -
  D9C10_RS01750 (D9C10_01750) - 313947..315107 (+) 1161 WP_069837347.1 lysozyme inhibitor LprI family protein -
  D9C10_RS01755 (D9C10_01755) rapC 315255..316385 (+) 1131 WP_014479091.1 response regulator aspartate phosphatase RapH Regulator
  D9C10_RS01760 (D9C10_01760) phrH 316375..316548 (+) 174 WP_069837348.1 phosphatase RapH inhibitor PhrH -
  D9C10_RS01765 (D9C10_01765) yeeI 316708..317427 (+) 720 WP_003233863.1 YebC/PmpR family DNA-binding transcriptional regulator -
  D9C10_RS01770 (D9C10_01770) - 317561..317989 (+) 429 WP_121548734.1 spore coat protein -
  D9C10_RS01775 (D9C10_01775) yezE 318106..318690 (+) 585 WP_015252623.1 TetR/AcrR family transcriptional regulator -
  D9C10_RS01780 (D9C10_01780) yesE 318769..319212 (+) 444 WP_003233857.1 nuclear transport factor 2 family protein -
  D9C10_RS01785 (D9C10_01785) yesF 319209..320074 (+) 866 Protein_340 NAD-dependent epimerase/dehydratase family protein -
  D9C10_RS01790 (D9C10_01790) cotJA 320203..320451 (+) 249 WP_003219489.1 spore coat-associated protein CotJA -
  D9C10_RS01795 (D9C10_01795) cotJB 320435..320698 (+) 264 WP_003219491.1 spore coat protein CotJB -
  D9C10_RS01800 (D9C10_01800) cotJC 320713..321282 (+) 570 WP_014479096.1 spore coat protein CotJC -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 44030.39 Da        Isoelectric Point: 5.9937

>NTDB_id=278970 D9C10_RS01755 WP_014479091.1 315255..316385(+) (rapC) [Bacillus subtilis subsp. subtilis strain MH-1]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQKMEEDQDLLIYYSLMCFRHQLMLDYLEPGQPYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEKALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=278970 D9C10_RS01755 WP_014479091.1 315255..316385(+) (rapC) [Bacillus subtilis subsp. subtilis strain MH-1]
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTACAAGATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTGGAGCAGGACATTCAGAAGATGGAAGAGGATCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAGCCTTACGGAAATCGTCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAACCATCCCTTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAAAAGGCGCTGGAATTGGCCATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCAGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCTGCTGCGTTTTATCGGAAAGTGCTAAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(5-65)

Tetratricopeptide repeat (TPR_7)

(222-251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

40.957

100

0.41
  rapF Bacillus subtilis subsp. subtilis str. 168

40.053

100

0.402