Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4K39_RS18935 Genome accession   NZ_CP027706
Coordinates   4092301..4092705 (+) Length   134 a.a.
NCBI ID   WP_068576676.1    Uniprot ID   -
Organism   Pseudomonas sessilinigenes strain CMR12a     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4087301..4097705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4K39_RS18910 (C4K39_3832) pyrR 4088127..4088633 (-) 507 WP_124347173.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  C4K39_RS18915 (C4K39_3834) ruvX 4088894..4089331 (-) 438 WP_068576668.1 Holliday junction resolvase RuvX -
  C4K39_RS18920 (C4K39_3835) - 4089331..4089900 (-) 570 WP_124347174.1 YqgE/AlgH family protein -
  C4K39_RS18925 (C4K39_3836) - 4090063..4090962 (-) 900 WP_068576672.1 energy transducer TonB -
  C4K39_RS18930 (C4K39_3837) gshB 4091092..4092063 (-) 972 WP_068576674.1 glutathione synthase -
  C4K39_RS18935 (C4K39_3838) pilG 4092301..4092705 (+) 405 WP_068576676.1 twitching motility response regulator PilG Regulator
  C4K39_RS18940 (C4K39_3839) pilH 4092763..4093128 (+) 366 WP_068576792.1 twitching motility response regulator PilH -
  C4K39_RS18945 (C4K39_3840) - 4093140..4093679 (+) 540 WP_068576678.1 chemotaxis protein CheW -
  C4K39_RS18950 (C4K39_3842) - 4093810..4095873 (+) 2064 WP_068576679.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14749.20 Da        Isoelectric Point: 7.2445

>NTDB_id=278947 C4K39_RS18935 WP_068576676.1 4092301..4092705(+) (pilG) [Pseudomonas sessilinigenes strain CMR12a]
MEQQSNALKVMVIDDSKTIRRTAEMLLKNVGCEVITAVDGFEALAKIVDHHPGIIFVDIMMPRLDGYQTCALVKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIRAHVPDFVAQAPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=278947 C4K39_RS18935 WP_068576676.1 4092301..4092705(+) (pilG) [Pseudomonas sessilinigenes strain CMR12a]
ATGGAACAGCAATCCAACGCCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGGACGGCCGAAATGCTGTT
GAAGAACGTCGGTTGCGAAGTCATTACCGCAGTCGATGGGTTCGAGGCCCTGGCAAAGATCGTCGACCATCACCCCGGCA
TCATCTTCGTCGACATCATGATGCCGCGGCTCGACGGCTATCAGACCTGTGCGCTGGTCAAGAACAACAGCGCGTTCAAG
TCCACTCCAGTGATCATGCTGTCCTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGTTCCGACCAGTT
TCTGACCAAACCCTTCAGCAAGGAAGAACTGCTGAGCGCGATCAGGGCCCATGTCCCGGATTTCGTCGCGCAGGCGCCAC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701
  vicR Streptococcus mutans UA159

42.735

87.313

0.373

Multiple sequence alignment