Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C6571_RS11190 Genome accession   NZ_CP027669
Coordinates   2400852..2401250 (+) Length   132 a.a.
NCBI ID   WP_106446745.1    Uniprot ID   A0A2S0N0U9
Organism   Simplicispira suum strain SC1-8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2395852..2406250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C6571_RS11170 (C6571_11170) - 2397355..2398227 (-) 873 WP_106446743.1 acyltransferase -
  C6571_RS11175 (C6571_11175) hemL 2398304..2399608 (-) 1305 WP_106446744.1 glutamate-1-semialdehyde 2,1-aminomutase -
  C6571_RS11180 (C6571_11180) thiD 2399592..2400454 (-) 863 Protein_2188 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  C6571_RS11185 (C6571_11185) - 2400632..2400802 (+) 171 WP_106448192.1 rubredoxin -
  C6571_RS11190 (C6571_11190) pilG 2400852..2401250 (+) 399 WP_106446745.1 response regulator Regulator
  C6571_RS11195 (C6571_11195) - 2401250..2401615 (+) 366 WP_106446746.1 response regulator -
  C6571_RS11200 (C6571_11200) - 2401632..2402159 (+) 528 WP_106446747.1 chemotaxis protein CheW -
  C6571_RS11205 (C6571_11205) - 2402181..2404445 (+) 2265 WP_106446748.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14544.74 Da        Isoelectric Point: 7.1321

>NTDB_id=278860 C6571_RS11190 WP_106446745.1 2400852..2401250(+) (pilG) [Simplicispira suum strain SC1-8]
MTTTGASFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYHPQVIFCDILMPKLDGYQTVAIIKRNPNFA
QTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVQQFASVSQGAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=278860 C6571_RS11190 WP_106446745.1 2400852..2401250(+) (pilG) [Simplicispira suum strain SC1-8]
TTGACTACAACCGGTGCCTCCTTCAAAGTGCTCGTGGTGGACGATAGCAATACCATTCGGCGAAGTGCCGAGATTTTTCT
GAAGCAAGGTGGGCACGAAGTGCTTCTTGCCGATGATGGATTCGATGCCTTGGCAAAGGTCAACGATTATCATCCTCAGG
TGATTTTCTGCGATATTTTAATGCCCAAGCTTGACGGTTATCAGACTGTCGCCATCATCAAGAGAAATCCGAATTTCGCG
CAAACACCAGTCGTCATGCTGTCGTCAAAGGACGGCGTATTCGACAAAGCGCGCGGCAGGATGGTTGGATGCCAGGATTA
TCTGACCAAACCGTTTACCAAAGATCAATTGCTGCAGGCAGTGCAGCAATTTGCCAGTGTTTCCCAAGGAGCGATGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S0N0U9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

55.833

90.909

0.508

Multiple sequence alignment