Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C6568_RS12235 Genome accession   NZ_CP027667
Coordinates   2611272..2611676 (+) Length   134 a.a.
NCBI ID   WP_106684358.1    Uniprot ID   A0A2R3QDR8
Organism   Melaminivora suipulveris strain SC2-9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2606272..2616676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C6568_RS12210 (C6568_12210) - 2606638..2606931 (+) 294 WP_106684353.1 helix-turn-helix domain-containing protein -
  C6568_RS12215 (C6568_12215) purH 2606999..2608597 (+) 1599 WP_106684354.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  C6568_RS12220 (C6568_12220) hemL 2608694..2610019 (-) 1326 WP_106684355.1 glutamate-1-semialdehyde 2,1-aminomutase -
  C6568_RS12225 (C6568_12225) thiD 2610003..2610956 (-) 954 WP_106684356.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  C6568_RS12230 (C6568_12230) - 2611074..2611226 (+) 153 WP_106684357.1 rubredoxin -
  C6568_RS12235 (C6568_12235) pilG 2611272..2611676 (+) 405 WP_106684358.1 response regulator Regulator
  C6568_RS12240 (C6568_12240) - 2611676..2612041 (+) 366 WP_106684359.1 response regulator -
  C6568_RS12245 (C6568_12245) - 2612056..2612583 (+) 528 WP_106684360.1 chemotaxis protein CheW -
  C6568_RS12250 (C6568_12250) - 2612620..2614896 (+) 2277 WP_106684361.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14928.19 Da        Isoelectric Point: 6.9256

>NTDB_id=278836 C6568_RS12235 WP_106684358.1 2611272..2611676(+) (pilG) [Melaminivora suipulveris strain SC2-9]
MATTTTGPTVRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYEPQLIFCDILMPKLDGYQTCAIIKRNAR
FADTPVVMLSSKDGIFDKARGRMVGCQDYLTKPFTKDQLLQVVRQFANAPQETK

Nucleotide


Download         Length: 405 bp        

>NTDB_id=278836 C6568_RS12235 WP_106684358.1 2611272..2611676(+) (pilG) [Melaminivora suipulveris strain SC2-9]
TTGGCTACGACAACGACCGGTCCCACCGTCAGGGTGCTCGTGGTGGACGACAGCAACACCATCCGGCGCAGCGCCGAGAT
CTTCCTCAAGCAGGGCGGCCACGAGGTGCTGCTGGCCGACGACGGTTTCGACGCGCTGGCCAAGGTCAACGACTATGAGC
CGCAGCTCATCTTCTGCGACATCCTGATGCCCAAGCTCGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCCCGC
TTTGCCGATACCCCGGTGGTCATGCTGTCGTCCAAGGACGGCATCTTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCA
GGACTACCTGACCAAACCCTTCACCAAGGACCAACTGCTGCAGGTGGTGCGGCAGTTCGCCAACGCCCCACAGGAAACCA
AGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2R3QDR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

53.719

90.299

0.485

Multiple sequence alignment