Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   SPYM_RS08760 Genome accession   NC_009332
Coordinates   1744839..1745552 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes str. Manfredo     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1739839..1750552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYM_RS08750 (SpyM51742) treC 1740909..1742537 (-) 1629 WP_011889217.1 alpha,alpha-phosphotrehalase -
  SPYM_RS08755 (SpyM51743) treP 1742604..1744628 (-) 2025 WP_011889218.1 PTS system trehalose-specific EIIBC component -
  SPYM_RS08760 (SpyM51744) treR 1744839..1745552 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  SPYM_RS08765 (SpyM51745) - 1745831..1746157 (-) 327 WP_011185054.1 winged helix-turn-helix transcriptional regulator -
  SPYM_RS08770 (SpyM51746) - 1746343..1747191 (+) 849 Protein_1700 VOC family protein -
  SPYM_RS08775 (SpyM51747) yaaA 1747233..1747964 (+) 732 WP_011889219.1 peroxide stress protein YaaA -
  SPYM_RS08780 (SpyM51748) nrdG 1748138..1748752 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  SPYM_RS08785 (SpyM51749) - 1748752..1749261 (-) 510 WP_002991345.1 GNAT family N-acetyltransferase -
  SPYM_RS08790 (SpyM51750) - 1749270..1750205 (-) 936 WP_011889220.1 Gfo/Idh/MocA family protein -
  SPYM_RS09905 (SpyM51751) - 1750234..1750380 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=27879 SPYM_RS08760 WP_002982243.1 1744839..1745552(+) (treR) [Streptococcus pyogenes str. Manfredo]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=27879 SPYM_RS08760 WP_002982243.1 1744839..1745552(+) (treR) [Streptococcus pyogenes str. Manfredo]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTTTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment