Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C4901_RS14595 Genome accession   NZ_CP027663
Coordinates   2870651..2871049 (-) Length   132 a.a.
NCBI ID   WP_110137947.1    Uniprot ID   A0A2Z3R2K2
Organism   Acidiferrobacter sp. SPIII_3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2865651..2876049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C4901_RS14580 (C4901_14520) - 2867497..2869626 (-) 2130 WP_205736040.1 methyl-accepting chemotaxis protein -
  C4901_RS14585 (C4901_14525) - 2869683..2870228 (-) 546 WP_110137946.1 chemotaxis protein CheW -
  C4901_RS14590 (C4901_14530) - 2870225..2870587 (-) 363 WP_065971671.1 PleD family two-component system response regulator -
  C4901_RS14595 (C4901_14535) pilG 2870651..2871049 (-) 399 WP_110137947.1 PleD family two-component system response regulator Regulator
  C4901_RS14600 (C4901_14540) gshA 2871275..2872585 (+) 1311 WP_110137948.1 glutamate--cysteine ligase -
  C4901_RS14605 (C4901_14545) gshB 2872582..2873547 (+) 966 WP_110137949.1 glutathione synthase -
  C4901_RS14610 (C4901_14550) - 2873559..2874413 (+) 855 WP_168185754.1 energy transducer TonB -
  C4901_RS14615 (C4901_14555) - 2874597..2875160 (+) 564 WP_110137951.1 YqgE/AlgH family protein -
  C4901_RS14620 (C4901_14560) ruvX 2875157..2875612 (+) 456 WP_168185755.1 Holliday junction resolvase RuvX -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14825.25 Da        Isoelectric Point: 8.0723

>NTDB_id=278758 C4901_RS14595 WP_110137947.1 2870651..2871049(-) (pilG) [Acidiferrobacter sp. SPIII_3]
MAVRNVAARVPVGIKVMIIDDSNTIRRTAEALLKKAGYDVYTAGDGFEAMSVITDRRPDIIFVDIMMPRLDGYQTCLLIK
NNKDFKHIPVIMLSSKDGLFDKARGRIAGSEEHVNKPFTQEELVEVIARHVH

Nucleotide


Download         Length: 399 bp        

>NTDB_id=278758 C4901_RS14595 WP_110137947.1 2870651..2871049(-) (pilG) [Acidiferrobacter sp. SPIII_3]
ATGGCCGTCCGAAACGTAGCGGCGAGGGTTCCCGTGGGTATCAAGGTTATGATAATCGATGACAGCAATACGATACGACG
AACGGCGGAGGCCCTTTTAAAGAAGGCGGGCTACGACGTCTACACGGCGGGGGACGGTTTCGAGGCCATGTCGGTTATCA
CCGACCGCCGGCCGGACATCATCTTCGTGGACATCATGATGCCCCGGCTAGACGGTTACCAGACCTGCCTTTTGATAAAA
AATAACAAGGATTTCAAGCATATACCGGTCATCATGCTTTCCAGCAAGGACGGCTTGTTCGACAAGGCGCGCGGACGTAT
CGCCGGATCCGAGGAGCATGTGAACAAACCCTTCACCCAGGAAGAGCTGGTGGAGGTCATTGCCCGGCATGTGCACTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z3R2K2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

64.706

90.152

0.583

Multiple sequence alignment