Detailed information NTG0278585

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: DSM101856_RS05350
• Genome accession: NZ_CP027639
• Coordinates: 1032183..1032920 (+)
• Length: 245 a.a.
• NCBI ID: WP_002839216.1
• Uniprot ID: -
• Organism: Campylobacter coli strain meC0280
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1027183..1037920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DSM101856_RS05320 (DSM101856_01070)	rpsF	1027331..1027708 (+)	378	WP_002777082.1	30S ribosomal protein S6	-
DSM101856_RS05325 (DSM101856_01071)	-	1027717..1028265 (+)	549	WP_002777084.1	single-stranded DNA-binding protein	-
DSM101856_RS05330 (DSM101856_01072)	rpsR	1028276..1028536 (+)	261	WP_002777087.1	30S ribosomal protein S18	-
DSM101856_RS05335 (DSM101856_01073)	lon	1028592..1030967 (-)	2376	WP_002783351.1	endopeptidase La	-
DSM101856_RS05340 (DSM101856_01074)	bamD	1030983..1031630 (-)	648	WP_002780248.1	outer membrane protein assembly factor BamD	-
DSM101856_RS05345 (DSM101856_01075)	fliW	1031794..1032183 (+)	390	WP_002777093.1	flagellar assembly protein FliW	-
DSM101856_RS05350 (DSM101856_01076)	proC	1032183..1032920 (+)	738	WP_002839216.1	pyrroline-5-carboxylate reductase	Machinery gene
DSM101856_RS05355 (DSM101856_01077)	ctsT	1032917..1033222 (+)	306	WP_002783353.1	hypothetical protein	Machinery gene
DSM101856_RS05360 (DSM101856_01078)	-	1033215..1033883 (+)	669	WP_002790524.1	hypothetical protein	-
DSM101856_RS05365 (DSM101856_01079)	-	1033880..1034332 (+)	453	WP_002777117.1	hypothetical protein	-
DSM101856_RS05370 (DSM101856_01080)	-	1034325..1034954 (-)	630	WP_002783358.1	uroporphyrinogen-III synthase	-
DSM101856_RS05375 (DSM101856_01081)	thiE	1034932..1035564 (-)	633	WP_002783359.1	thiamine phosphate synthase	-
DSM101856_RS05380 (DSM101856_01082)	thiD	1035554..1036366 (-)	813	WP_193227999.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
DSM101856_RS05385 (DSM101856_01083)	-	1036366..1037049 (-)	684	WP_002780240.1	3-methyladenine DNA glycosylase	-
DSM101856_RS05390 (DSM101856_01084)	-	1037046..1037807 (-)	762	WP_025443303.1	ATP-binding protein	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26796.25 Da
• Isoelectric Point: 9.5957

>NTDB_id=278585 DSM101856_RS05350 WP_002839216.1 1032183..1032920(+) (proC) [Campylobacter coli strain meC0280]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFKAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=278585 DSM101856_RS05350 WP_002839216.1 1032183..1032920(+) (proC) [Campylobacter coli strain meC0280]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTGGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTAAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.417	97.959	0.788