Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | DSM104627_RS01540 | Genome accession | NZ_CP027638 |
| Coordinates | 309294..309890 (+) | Length | 198 a.a. |
| NCBI ID | WP_002779314.1 | Uniprot ID | A0A0Q2JMT7 |
| Organism | Campylobacter coli strain meC0467 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 304294..314890
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSM104627_RS01530 (DSM104627_00308) | ctsR | 307594..307905 (+) | 312 | WP_002779316.1 | hypothetical protein | Machinery gene |
| DSM104627_RS01535 (DSM104627_00309) | ctsD | 307883..309301 (+) | 1419 | WP_002833219.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| DSM104627_RS01540 (DSM104627_00310) | ctsP | 309294..309890 (+) | 597 | WP_002779314.1 | ATP-binding protein | Machinery gene |
| DSM104627_RS01545 (DSM104627_00311) | - | 309887..310483 (+) | 597 | WP_002779313.1 | CDC27 family protein | - |
| DSM104627_RS01550 (DSM104627_00312) | ctsE | 310476..312038 (+) | 1563 | WP_002779312.1 | GspE/PulE family protein | Machinery gene |
| DSM104627_RS01555 (DSM104627_00313) | ctsF | 312025..313200 (+) | 1176 | WP_002781160.1 | type II secretion system F family protein | Machinery gene |
| DSM104627_RS01560 (DSM104627_00314) | - | 313197..313961 (-) | 765 | WP_002781157.1 | TSUP family transporter | - |
| DSM104627_RS01565 (DSM104627_00315) | - | 313964..314728 (-) | 765 | WP_002781156.1 | TIGR02757 family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 23633.42 Da Isoelectric Point: 9.1569
>NTDB_id=278559 DSM104627_RS01540 WP_002779314.1 309294..309890(+) (ctsP) [Campylobacter coli strain meC0467]
MNNIIAFRQECFDQINALLKNKALILLWGKSGSGKSVLLQRLALYHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGM
YSPNVLELIRIYSDEMSFVLSSHKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK
MNNIIAFRQECFDQINALLKNKALILLWGKSGSGKSVLLQRLALYHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGM
YSPNVLELIRIYSDEMSFVLSSHKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK
Nucleotide
Download Length: 597 bp
>NTDB_id=278559 DSM104627_RS01540 WP_002779314.1 309294..309890(+) (ctsP) [Campylobacter coli strain meC0467]
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTGATCAAATCAATGCCTTATTAAAAAATAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGCTATATCATAATGAAGATTTTACCAATGAAA
TTTTTACAGATGAAAAAGATTTTCATCATTTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAGTCCTAATGTATTAGAACTAATTCGGATTTATAGCGATGAAATGAGTTTTGTGCTTAGCTCGCATAAAAAAATCAA
TCTTTTTGAAGAGGAGTATTTTAAAAGTCGTTTTAGTGCTATTTTTTGGCTTCAAAAACCTGATATAAATGAATTAAGCA
ATTATATCAAAATGAAATTTAATCAAGACTTTCCCCAAAAATCTTTAAAATTTCTTATGAAAATTTATCAAGGAAATTTA
AGGTATTTAGACAAGATACTTCAAAGTTTTTGCGAATTAAACACCTATTTAAACAATAAAAAAAGTCAAGATTATATTTT
AAGACTAAGCGCATTAGAACAGGGATTTTTAAAATGA
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTGATCAAATCAATGCCTTATTAAAAAATAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGCTATATCATAATGAAGATTTTACCAATGAAA
TTTTTACAGATGAAAAAGATTTTCATCATTTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAGTCCTAATGTATTAGAACTAATTCGGATTTATAGCGATGAAATGAGTTTTGTGCTTAGCTCGCATAAAAAAATCAA
TCTTTTTGAAGAGGAGTATTTTAAAAGTCGTTTTAGTGCTATTTTTTGGCTTCAAAAACCTGATATAAATGAATTAAGCA
ATTATATCAAAATGAAATTTAATCAAGACTTTCCCCAAAAATCTTTAAAATTTCTTATGAAAATTTATCAAGGAAATTTA
AGGTATTTAGACAAGATACTTCAAAGTTTTTGCGAATTAAACACCTATTTAAACAATAAAAAAAGTCAAGATTATATTTT
AAGACTAAGCGCATTAGAACAGGGATTTTTAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
57.921 |
100 |
0.591 |