Detailed information NTG0278507

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AM480_RS15660
• Genome accession: NZ_CP027611
• Coordinates: 3180770..3181471 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594590.1
• Uniprot ID: A0A427R546
• Organism: Acinetobacter baumannii strain AR_0101
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3175770..3186471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM480_RS15625 (AM480_15625)	kdsB	3176293..3177054 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AM480_RS15630 (AM480_15630)	-	3177066..3178046 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
AM480_RS15635 (AM480_15635)	-	3178058..3178399 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
AM480_RS15640 (AM480_15640)	-	3178417..3179190 (+)	774	WP_000497301.1	TatD family hydrolase	-
AM480_RS15645 (AM480_15645)	-	3179228..3179836 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AM480_RS15650 (AM480_15650)	-	3179846..3180400 (+)	555	WP_000841373.1	type II secretion system protein	-
AM480_RS15655 (AM480_15655)	xcpV	3180390..3180770 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AM480_RS15660 (AM480_15660)	xcpW	3180770..3181471 (+)	702	WP_000594590.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AM480_RS15665 (AM480_15665)	gspK	3181471..3182430 (+)	960	WP_000301471.1	type II secretion system minor pseudopilin GspK	-
AM480_RS15670 (AM480_15670)	-	3182661..3183257 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
AM480_RS15675 (AM480_15675)	ung	3183308..3184021 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
AM480_RS15680 (AM480_15680)	-	3184018..3185142 (+)	1125	WP_086241960.1	enoyl-CoA hydratase/isomerase family protein	-
AM480_RS15685 (AM480_15685)	tadA	3185149..3185652 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AM480_RS15690 (AM480_15690)	-	3185722..3186165 (+)	444	WP_001246674.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26627.52 Da
• Isoelectric Point: 9.3468

>NTDB_id=278507 AM480_RS15660 WP_000594590.1 3180770..3181471(+) (xcpW) [Acinetobacter baumannii strain AR_0101]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWTYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=278507 AM480_RS15660 WP_000594590.1 3180770..3181471(+) (xcpW) [Acinetobacter baumannii strain AR_0101]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGACTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A427R546

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991