Detailed information NTG0277773

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AM467_RS09010
• Genome accession: NZ_CP027530
• Coordinates: 1851425..1852126 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain AR_0088
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1846425..1857126

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM467_RS08975 (AM467_08975)	kdsB	1846948..1847709 (+)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AM467_RS08980 (AM467_08980)	-	1847721..1848701 (+)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
AM467_RS08985 (AM467_08985)	-	1848713..1849054 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
AM467_RS08990 (AM467_08990)	-	1849072..1849845 (+)	774	WP_000497298.1	TatD family hydrolase	-
AM467_RS08995 (AM467_08995)	-	1849883..1850491 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AM467_RS09000 (AM467_09000)	-	1850501..1851055 (+)	555	WP_000841379.1	type II secretion system protein	-
AM467_RS09005 (AM467_09005)	xcpV	1851045..1851425 (+)	381	WP_000836910.1	type II secretion system minor pseudopilin GspI	Machinery gene
AM467_RS09010 (AM467_09010)	xcpW	1851425..1852126 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AM467_RS09015 (AM467_09015)	gspK	1852126..1853085 (+)	960	WP_000301481.1	type II secretion system minor pseudopilin GspK	-
AM467_RS09020 (AM467_09020)	-	1853315..1853911 (+)	597	WP_000908451.1	6-pyruvoyl trahydropterin synthase family protein	-
AM467_RS09025 (AM467_09025)	ung	1853962..1854675 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
AM467_RS09030 (AM467_09030)	-	1854672..1855796 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AM467_RS09035 (AM467_09035)	tadA	1855803..1856306 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AM467_RS09040 (AM467_09040)	-	1856376..1856819 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=277773 AM467_RS09010 WP_000594572.1 1851425..1852126(+) (xcpW) [Acinetobacter baumannii strain AR_0088]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=277773 AM467_RS09010 WP_000594572.1 1851425..1852126(+) (xcpW) [Acinetobacter baumannii strain AR_0088]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991