Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | C6N67_RS00405 | Genome accession | NZ_CP027427 |
| Coordinates | 64216..66030 (+) | Length | 604 a.a. |
| NCBI ID | WP_106443671.1 | Uniprot ID | - |
| Organism | Weissella cibaria strain BM2 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 59216..71030
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N67_RS00380 (C6N67_00380) | - | 59467..59784 (+) | 318 | WP_010372498.1 | PTS sugar transporter subunit IIB | - |
| C6N67_RS00385 (C6N67_00385) | - | 59829..60152 (+) | 324 | WP_010372502.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| C6N67_RS00390 (C6N67_00390) | - | 60158..61609 (+) | 1452 | WP_106443670.1 | 6-phospho-beta-glucosidase | - |
| C6N67_RS00395 (C6N67_00395) | - | 61676..63040 (+) | 1365 | WP_085639099.1 | PTS sugar transporter subunit IIC | - |
| C6N67_RS00400 (C6N67_00400) | - | 63142..64176 (+) | 1035 | WP_085639102.1 | competence protein CoiA family protein | - |
| C6N67_RS00405 (C6N67_00405) | pepF | 64216..66030 (+) | 1815 | WP_106443671.1 | oligoendopeptidase F | Regulator |
| C6N67_RS00410 (C6N67_00410) | - | 66117..66836 (-) | 720 | WP_106443672.1 | MIP/aquaporin family protein | - |
| C6N67_RS00415 (C6N67_00415) | - | 67144..67533 (+) | 390 | WP_010372520.1 | DUF948 domain-containing protein | - |
| C6N67_RS00420 (C6N67_00420) | - | 67549..68121 (+) | 573 | WP_010372524.1 | hypothetical protein | - |
| C6N67_RS00425 (C6N67_00425) | ccpA | 68180..69181 (-) | 1002 | WP_010373031.1 | catabolite control protein A | - |
| C6N67_RS00430 (C6N67_00430) | - | 69433..70533 (+) | 1101 | WP_106443673.1 | Xaa-Pro peptidase family protein | - |
Sequence
Protein
Download Length: 604 a.a. Molecular weight: 67638.48 Da Isoelectric Point: 4.2890
>NTDB_id=277077 C6N67_RS00405 WP_106443671.1 64216..66030(+) (pepF) [Weissella cibaria strain BM2]
MAKELPLRDALPESMTWNLQTIFASDEAWEDAFEELADRLESADFFAQSATTSGTDLYNALQYGLGVMRDLEKLYVYASM
KSDQDTANAYYQGLSNRAEALAARVSAAIAFFDPAVLSLSEAELTAFFEAEPKLGAYKHYFESILTQQGHVLTPDQEALL
AAAGDVFGASERTFGVLDNADIKFEAVANEDGELETLSNGVYSRLLESTDPEVRRNAFQTFYKSYVSLENTFASLIASHV
KGHNFMAAVHNYDNAREAALAGNHVPEVVYDTLVAEVNEALPLLHRYVALRKQLLGLDELHSYDLYTPILGEPDFTIDYE
SAQAEALKALAPLGEDYLEVVNTAFDNRCIDVIENKGKRSGAYSGGSYDTNPFILLNWVDNLNNLSTLVHEMGHSVHSYL
TRQNQPYHYGDYPIFLAEIASTTNENLLTDYLLKTVTDKKLRAYILNQYLDGVKGTVFRQTQFAEFEQWMHVTDAQGVPL
TADVLDEAYGELNRRYYGPALTFDDEIAHEWERIPHFYYNFYVFQYSTGFAAATAMADKILTEGAPAVAAYKEYLKAGSS
AFPIDVMKKAGLDMTKPDYLRDTFKVFEQRLNEFEALVAELAAE
MAKELPLRDALPESMTWNLQTIFASDEAWEDAFEELADRLESADFFAQSATTSGTDLYNALQYGLGVMRDLEKLYVYASM
KSDQDTANAYYQGLSNRAEALAARVSAAIAFFDPAVLSLSEAELTAFFEAEPKLGAYKHYFESILTQQGHVLTPDQEALL
AAAGDVFGASERTFGVLDNADIKFEAVANEDGELETLSNGVYSRLLESTDPEVRRNAFQTFYKSYVSLENTFASLIASHV
KGHNFMAAVHNYDNAREAALAGNHVPEVVYDTLVAEVNEALPLLHRYVALRKQLLGLDELHSYDLYTPILGEPDFTIDYE
SAQAEALKALAPLGEDYLEVVNTAFDNRCIDVIENKGKRSGAYSGGSYDTNPFILLNWVDNLNNLSTLVHEMGHSVHSYL
TRQNQPYHYGDYPIFLAEIASTTNENLLTDYLLKTVTDKKLRAYILNQYLDGVKGTVFRQTQFAEFEQWMHVTDAQGVPL
TADVLDEAYGELNRRYYGPALTFDDEIAHEWERIPHFYYNFYVFQYSTGFAAATAMADKILTEGAPAVAAYKEYLKAGSS
AFPIDVMKKAGLDMTKPDYLRDTFKVFEQRLNEFEALVAELAAE
Nucleotide
Download Length: 1815 bp
>NTDB_id=277077 C6N67_RS00405 WP_106443671.1 64216..66030(+) (pepF) [Weissella cibaria strain BM2]
ATGGCCAAAGAATTACCATTACGAGATGCATTGCCTGAGTCAATGACTTGGAATTTGCAGACGATTTTTGCTTCTGATGA
AGCGTGGGAAGATGCCTTTGAAGAATTGGCCGATCGGTTAGAGTCAGCGGATTTCTTCGCCCAATCAGCAACGACGTCTG
GTACAGATTTGTACAATGCGTTGCAATACGGTTTGGGTGTGATGCGTGACTTAGAAAAGCTGTATGTCTATGCTTCAATG
AAATCAGACCAAGATACAGCCAACGCTTATTATCAAGGGTTGAGCAATCGAGCTGAAGCCTTGGCAGCACGTGTTTCGGC
GGCCATTGCATTCTTTGATCCAGCTGTTTTGTCACTTTCAGAAGCTGAATTAACGGCCTTTTTTGAAGCAGAACCTAAGC
TGGGGGCGTACAAGCATTACTTCGAGAGTATCTTGACGCAACAAGGTCACGTCTTAACGCCAGACCAAGAAGCATTGTTA
GCTGCTGCGGGGGATGTTTTTGGGGCGTCAGAACGGACGTTTGGTGTGTTGGATAATGCCGATATTAAGTTTGAAGCTGT
TGCCAACGAAGATGGTGAACTGGAGACGTTGTCAAACGGTGTCTATTCACGTTTATTGGAGTCGACTGACCCAGAAGTAC
GTCGAAATGCTTTCCAAACGTTCTACAAGTCATATGTCTCACTTGAAAATACCTTTGCATCTTTGATTGCAAGTCACGTG
AAAGGCCATAACTTTATGGCGGCGGTTCACAACTATGATAATGCGCGTGAAGCTGCTTTAGCTGGTAACCATGTGCCAGA
AGTGGTGTACGATACATTGGTGGCGGAAGTAAATGAAGCGTTGCCATTGTTGCATCGTTACGTTGCCCTCCGAAAGCAAT
TGTTGGGCTTGGACGAATTGCACTCATACGATTTGTATACCCCAATTTTGGGTGAACCTGACTTTACGATTGATTACGAA
TCTGCTCAGGCTGAGGCATTAAAGGCGTTGGCACCATTGGGGGAAGATTATCTGGAAGTTGTCAATACAGCCTTTGATAA
TCGTTGTATTGATGTCATTGAGAATAAGGGCAAGCGTTCAGGAGCTTACTCGGGTGGTTCATACGATACAAATCCATTCA
TTTTGCTGAACTGGGTCGATAACTTGAACAATTTGAGCACTTTAGTTCACGAAATGGGCCACTCAGTGCACTCATATTTG
ACTCGTCAAAATCAGCCTTACCACTACGGCGATTACCCAATCTTCTTGGCTGAAATTGCGTCAACGACGAACGAAAACTT
GTTGACGGATTATTTGCTTAAGACGGTGACGGATAAGAAGTTGCGTGCATATATCTTGAATCAGTACTTGGATGGTGTGA
AGGGAACGGTCTTCCGCCAAACTCAATTTGCAGAGTTTGAGCAATGGATGCACGTGACGGATGCGCAAGGCGTGCCGTTG
ACTGCTGATGTTTTGGATGAGGCCTATGGTGAACTTAACCGCCGTTACTACGGCCCAGCCTTGACGTTTGATGATGAAAT
TGCGCACGAGTGGGAGCGTATTCCACACTTCTATTACAACTTCTACGTGTTCCAATACAGTACTGGTTTTGCTGCTGCGA
CGGCAATGGCGGACAAGATTTTGACTGAAGGGGCACCGGCTGTGGCGGCTTACAAGGAATACTTGAAGGCCGGATCATCT
GCATTCCCAATCGATGTGATGAAGAAGGCCGGGCTTGATATGACTAAGCCAGATTACTTGCGTGACACATTCAAAGTGTT
CGAACAACGCTTGAATGAATTTGAAGCGTTGGTGGCAGAATTAGCTGCTGAATAA
ATGGCCAAAGAATTACCATTACGAGATGCATTGCCTGAGTCAATGACTTGGAATTTGCAGACGATTTTTGCTTCTGATGA
AGCGTGGGAAGATGCCTTTGAAGAATTGGCCGATCGGTTAGAGTCAGCGGATTTCTTCGCCCAATCAGCAACGACGTCTG
GTACAGATTTGTACAATGCGTTGCAATACGGTTTGGGTGTGATGCGTGACTTAGAAAAGCTGTATGTCTATGCTTCAATG
AAATCAGACCAAGATACAGCCAACGCTTATTATCAAGGGTTGAGCAATCGAGCTGAAGCCTTGGCAGCACGTGTTTCGGC
GGCCATTGCATTCTTTGATCCAGCTGTTTTGTCACTTTCAGAAGCTGAATTAACGGCCTTTTTTGAAGCAGAACCTAAGC
TGGGGGCGTACAAGCATTACTTCGAGAGTATCTTGACGCAACAAGGTCACGTCTTAACGCCAGACCAAGAAGCATTGTTA
GCTGCTGCGGGGGATGTTTTTGGGGCGTCAGAACGGACGTTTGGTGTGTTGGATAATGCCGATATTAAGTTTGAAGCTGT
TGCCAACGAAGATGGTGAACTGGAGACGTTGTCAAACGGTGTCTATTCACGTTTATTGGAGTCGACTGACCCAGAAGTAC
GTCGAAATGCTTTCCAAACGTTCTACAAGTCATATGTCTCACTTGAAAATACCTTTGCATCTTTGATTGCAAGTCACGTG
AAAGGCCATAACTTTATGGCGGCGGTTCACAACTATGATAATGCGCGTGAAGCTGCTTTAGCTGGTAACCATGTGCCAGA
AGTGGTGTACGATACATTGGTGGCGGAAGTAAATGAAGCGTTGCCATTGTTGCATCGTTACGTTGCCCTCCGAAAGCAAT
TGTTGGGCTTGGACGAATTGCACTCATACGATTTGTATACCCCAATTTTGGGTGAACCTGACTTTACGATTGATTACGAA
TCTGCTCAGGCTGAGGCATTAAAGGCGTTGGCACCATTGGGGGAAGATTATCTGGAAGTTGTCAATACAGCCTTTGATAA
TCGTTGTATTGATGTCATTGAGAATAAGGGCAAGCGTTCAGGAGCTTACTCGGGTGGTTCATACGATACAAATCCATTCA
TTTTGCTGAACTGGGTCGATAACTTGAACAATTTGAGCACTTTAGTTCACGAAATGGGCCACTCAGTGCACTCATATTTG
ACTCGTCAAAATCAGCCTTACCACTACGGCGATTACCCAATCTTCTTGGCTGAAATTGCGTCAACGACGAACGAAAACTT
GTTGACGGATTATTTGCTTAAGACGGTGACGGATAAGAAGTTGCGTGCATATATCTTGAATCAGTACTTGGATGGTGTGA
AGGGAACGGTCTTCCGCCAAACTCAATTTGCAGAGTTTGAGCAATGGATGCACGTGACGGATGCGCAAGGCGTGCCGTTG
ACTGCTGATGTTTTGGATGAGGCCTATGGTGAACTTAACCGCCGTTACTACGGCCCAGCCTTGACGTTTGATGATGAAAT
TGCGCACGAGTGGGAGCGTATTCCACACTTCTATTACAACTTCTACGTGTTCCAATACAGTACTGGTTTTGCTGCTGCGA
CGGCAATGGCGGACAAGATTTTGACTGAAGGGGCACCGGCTGTGGCGGCTTACAAGGAATACTTGAAGGCCGGATCATCT
GCATTCCCAATCGATGTGATGAAGAAGGCCGGGCTTGATATGACTAAGCCAGATTACTTGCGTGACACATTCAAAGTGTT
CGAACAACGCTTGAATGAATTTGAAGCGTTGGTGGCAGAATTAGCTGCTGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
53.299 |
97.848 |
0.522 |