Detailed information NTG0276958

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: CFK78_RS07440
• Genome accession: NZ_CP032633
• Coordinates: 1489836..1490882 (-)
• Length: 348 a.a.
• NCBI ID: WP_061826983.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain ZFM220
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1484836..1495882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CFK78_RS07415 (CFK78_07415)	rpsT	1484897..1485151 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
CFK78_RS07420 (CFK78_07420)	holA	1485220..1486248 (-)	1029	WP_061826985.1	DNA polymerase III subunit delta	-
CFK78_RS07425 (CFK78_07425)	comEC	1486245..1488311 (-)	2067	WP_226474266.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CFK78_RS07430 (CFK78_07430)	-	1488509..1488997 (-)	489	WP_011374770.1	ComE operon protein 2	-
CFK78_RS07435 (CFK78_07435)	comEA	1489055..1489762 (-)	708	WP_226474265.1	helix-hairpin-helix domain-containing protein	Machinery gene
CFK78_RS07440 (CFK78_07440)	sepM	1489836..1490882 (-)	1047	WP_061826983.1	SepM family pheromone-processing serine protease	Regulator
CFK78_RS07445 (CFK78_07445)	coaD	1490884..1491381 (-)	498	WP_061826982.1	pantetheine-phosphate adenylyltransferase	-
CFK78_RS07450 (CFK78_07450)	rsmD	1491394..1491948 (-)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
CFK78_RS07455 (CFK78_07455)	-	1491953..1492243 (-)	291	WP_011374775.1	YlbG family protein	-
CFK78_RS07460 (CFK78_07460)	-	1492267..1493355 (-)	1089	WP_061826981.1	CAP-associated domain-containing protein	-
CFK78_RS07465 (CFK78_07465)	-	1493366..1494553 (-)	1188	WP_011374777.1	FtsW/RodA/SpoVE family cell cycle protein	-
CFK78_RS07470 (CFK78_07470)	-	1494562..1494858 (-)	297	WP_016265221.1	DUF1507 family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38160.00 Da
• Isoelectric Point: 9.6893

>NTDB_id=276958 CFK78_RS07440 WP_061826983.1 1489836..1490882(-) (sepM) [Latilactobacillus sakei strain ZFM220]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYNTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLLRTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRKIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=276958 CFK78_RS07440 WP_061826983.1 1489836..1490882(-) (sepM) [Latilactobacillus sakei strain ZFM220]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACAATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACTAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCGATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTAAAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGCACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACCGTCT
TTTTTGCACCTAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
TCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (132-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (202-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	44.253	100	0.443