Detailed information NTG0276910

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: CEP79_RS03025
• Genome accession: NZ_CP027404
• Coordinates: 615097..616536 (-)
• Length: 479 a.a.
• NCBI ID: WP_000748996.1
• Uniprot ID: Q9ZJ97
• Organism: Helicobacter pylori strain FDAARGOS_300
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 610097..621536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEP79_RS03000 (CEP79_03000)	recG	611234..613105 (-)	1872	WP_046656380.1	ATP-dependent DNA helicase RecG	-
CEP79_RS03005 (CEP79_03005)	-	613182..613529 (+)	348	WP_000837074.1	hypothetical protein	-
CEP79_RS03010 (CEP79_03010)	-	613533..614168 (+)	636	WP_000668069.1	outer membrane protein	-
CEP79_RS03015 (CEP79_03015)	-	614165..614917 (-)	753	WP_000767522.1	exodeoxyribonuclease III	-
CEP79_RS03025 (CEP79_03025)	comH	615097..616536 (-)	1440	WP_000748996.1	hypothetical protein	Machinery gene
CEP79_RS03030 (CEP79_03030)	dnaA	616757..618130 (-)	1374	WP_000380659.1	chromosomal replication initiator protein DnaA	-
CEP79_RS03035 (CEP79_03035)	-	618283..618825 (+)	543	WP_000923012.1	hypothetical protein	-
CEP79_RS03040 (CEP79_03040)	-	618870..619109 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
CEP79_RS03045 (CEP79_03045)	glmS	619110..620903 (+)	1794	WP_000334347.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54595.49 Da
• Isoelectric Point: 7.1208

>NTDB_id=276910 CEP79_RS03025 WP_000748996.1 615097..616536(-) (comH) [Helicobacter pylori strain FDAARGOS_300]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPTNEVKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPNNTSSADASENNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDKDKEITTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=276910 CEP79_RS03025 WP_000748996.1 615097..616536(-) (comH) [Helicobacter pylori strain FDAARGOS_300]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
GATTAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACTCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCCACTAACGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAGTGCTGATGCGA
GTGAAAACAATGAAAGCAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTCGCA
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGACAAAGA
GATTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCCAGA
AGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACCAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATATATGAACGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGTAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGCGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

3D structure

• AlphaFold DB: Q9ZJ97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.319	100	0.933