Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | CEP79_RS02775 | Genome accession | NZ_CP027404 |
| Coordinates | 557486..558061 (-) | Length | 191 a.a. |
| NCBI ID | WP_001203557.1 | Uniprot ID | Q9ZJE6 |
| Organism | Helicobacter pylori strain FDAARGOS_300 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 552486..563061
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP79_RS02765 (CEP79_02765) | - | 554202..555421 (-) | 1220 | Protein_515 | restriction endonuclease subunit S | - |
| CEP79_RS02770 (CEP79_02770) | - | 555418..557454 (-) | 2037 | WP_001045380.1 | N-6 DNA methylase | - |
| CEP79_RS02775 (CEP79_02775) | comFC | 557486..558061 (-) | 576 | WP_001203557.1 | ComF family protein | Machinery gene |
| CEP79_RS02780 (CEP79_02780) | tmk | 558049..558624 (-) | 576 | WP_000289745.1 | dTMP kinase | - |
| CEP79_RS02785 (CEP79_02785) | coaD | 558628..559101 (-) | 474 | WP_001169238.1 | pantetheine-phosphate adenylyltransferase | - |
| CEP79_RS02790 (CEP79_02790) | - | 559101..559664 (-) | 564 | WP_000780089.1 | UbiX family flavin prenyltransferase | - |
| CEP79_RS02795 (CEP79_02795) | flgA | 559674..560330 (-) | 657 | WP_000699043.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| CEP79_RS02800 (CEP79_02800) | uvrD | 560327..562372 (-) | 2046 | WP_000505267.1 | DNA helicase UvrD | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21307.81 Da Isoelectric Point: 8.8914
>NTDB_id=276909 CEP79_RS02775 WP_001203557.1 557486..558061(-) (comFC) [Helicobacter pylori strain FDAARGOS_300]
MRCLTCLKLSFKPLCPNCLNDLPLSLKLRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRNFTFRGDESLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKLRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRNFTFRGDESLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=276909 CEP79_RS02775 WP_001203557.1 557486..558061(-) (comFC) [Helicobacter pylori strain FDAARGOS_300]
ATGCGTTGTTTAACCTGTTTGAAGCTTTCCTTTAAGCCCCTTTGCCCAAATTGCCTGAACGATTTGCCCTTAAGCTTAAA
GTTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTTATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAACAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGACGATAAAATCAAATCCTTTTACTCGCATTCCGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGGAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACTTTCAGGGGCGATGAAAGTTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACCTGTTTGAAGCTTTCCTTTAAGCCCCTTTGCCCAAATTGCCTGAACGATTTGCCCTTAAGCTTAAA
GTTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTTATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAACAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGACGATAAAATCAAATCCTTTTACTCGCATTCCGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGGAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACTTTCAGGGGCGATGAAAGTTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
97.382 |
100 |
0.974 |