Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   C6I29_RS11820 Genome accession   NZ_CP027365
Coordinates   2523853..2528223 (-) Length   1456 a.a.
NCBI ID   WP_005027622.1    Uniprot ID   A0A8H2K2K3
Organism   Acinetobacter radioresistens strain DSSKY-A-001     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2518853..2533223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C6I29_RS11790 elsL 2519859..2520368 (-) 510 WP_005027614.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  C6I29_RS11795 - 2520372..2520779 (-) 408 WP_005027615.1 YbaN family protein -
  C6I29_RS11800 - 2520885..2521754 (+) 870 WP_005027617.1 DUF1853 family protein -
  C6I29_RS11805 - 2521892..2522032 (+) 141 WP_005018775.1 entericidin A/B family lipoprotein -
  C6I29_RS11810 dapE 2522176..2523312 (+) 1137 WP_005027619.1 succinyl-diaminopimelate desuccinylase -
  C6I29_RS11815 - 2523373..2523837 (-) 465 WP_005027621.1 hypothetical protein -
  C6I29_RS11820 chpA 2523853..2528223 (-) 4371 WP_005027622.1 Hpt domain-containing protein Regulator
  C6I29_RS11825 - 2528389..2530470 (-) 2082 WP_005018770.1 methyl-accepting chemotaxis protein -
  C6I29_RS11830 - 2530516..2531052 (-) 537 WP_005018769.1 chemotaxis protein CheW -
  C6I29_RS11835 - 2531057..2531425 (-) 369 WP_005018768.1 response regulator -
  C6I29_RS11840 pilG 2531447..2531830 (-) 384 WP_005018759.1 twitching motility response regulator PilG Regulator
  C6I29_RS11845 - 2532169..2532750 (+) 582 WP_005027625.1 hypothetical protein -

Sequence

Protein


Download         Length: 1456 a.a.        Molecular weight: 164274.03 Da        Isoelectric Point: 4.4344

>NTDB_id=276613 C6I29_RS11820 WP_005027622.1 2523853..2528223(-) (chpA) [Acinetobacter radioresistens strain DSSKY-A-001]
MKQILKDLIGTTTLPEDSYLDQDAEILEIFVEELEEIFTDLDILIQQPEQQDKLTSIRRYFHTLKGSGRMVGAKSSGELA
WTVEDLLNRIIAKTQAFTLAISRYVELVFKIYKYKLFYNFKNSQPHAIDLRPLVLIGQQLQQHGSLEPALEELLELSWTL
CSPETVTGLELVEHTAETLPPLGVEKLEIHEEFDSLTAETLAIFLEESEEHLATIDEFLNNNEQGSNYNALIRALHTLRG
SSAMAQVEHIFEASSKIENLFKTMLQDELVSTSNETALLTHYAEFVRDYLYILKQECNIEQLERVYQTFNHAWENYGFHQ
EPVDDLVNPQGLVSRLLELEINQLLDAEFEFDQRTRTEYPEYLQLLVQQAQELVEHTRNRASQGVYDFTLELLQSYQQLL
AKPQLLNLDYAYELYTQAHQQLIYLFDTLAAGQRVSLSPAHQSLLEELSAFVQQEIQQVDELSTVTEPFEAPVDVAVLQH
TFNLGALSARIAADKALMHSEHSNQVADADLRDIFLEEAEELLAGMDSDLNSWTKESGQVTALNNLMRYLHTLKGGANMV
QATHMGLIAHELESIYQRIINGQVQVSTVLMSIIRLVQDELAERIQILREQQIDYPAPATIEILKNIESISTGVLVTTAE
PKVAEEKLSESSQNIESDITDCTLADAEIAEHSEELQTNEQVRSIVEEVFLEEAEELLQTAHKLLDQWVEERSNRSLLLQ
LQRNAHSLKGGARMAELEPVAVIAYALENTFEQFGLHNLTTSVYDPLLHTALRWLENAIFKEQYENFDSLKHSLDSIQFT
EIPAQLINQIPADNIVADGSLFEFVHGDGTEPPSMMGEWDNTERTENNEMIRISADLVEKMIDLAGENSINRSRIEMDVG
QVGSILSDMELAIQRLADQLRRMEGELESQIIAKHGTENSRYSDFDPLEMDQYSSLNQLSKSLAESASDLLDFKTTLSEK
IRDTEGLLLQQSRIQAEIQENLMRTRLVPFSRLLPRLQRIARQTSSALNRPAELVVQNTEGELDRNILERLVTPLEHMLR
NAIDHGIETIEQRLKQGKPESGRIELNINRQGTDVIITFTDDGQGINLDKLKNKALERGLIGAEQKLEAEELAQLIFHPG
LSTAAEITQISGRGVGLDVVQSSIKAMGGHVTVESVQGQGTTFTIRVPTTVAISDALMVKAGDQQYAVPLAQIERIVRIS
PSMLEDYFAGKEDTFRIDNMYYKLRYLSEFVANQSLPRLTGIAHSLPVLLIKGSSGQTVALLVDQLVGSRAQIVVKPVGQ
QLASVGAVAGATILGDGQVCLILDGQYIARQVQSSLRVKEVKESRELHRFNDERRLIMIVDDSVTVRKVTSRLLERQGYD
VVTAKDGVEAIEQLESIKPDLMLLDIEMPRMDGFEVTNLVRHHDVHRNMPIIMITSRTGEKHRERAFALGATQYMGKPFQ
EADLLANIEALLEVMV

Nucleotide


Download         Length: 4371 bp        

>NTDB_id=276613 C6I29_RS11820 WP_005027622.1 2523853..2528223(-) (chpA) [Acinetobacter radioresistens strain DSSKY-A-001]
ATGAAACAAATACTAAAAGACTTGATTGGAACAACGACTCTTCCTGAAGATAGCTATCTTGACCAAGATGCAGAGATTCT
TGAAATTTTTGTTGAAGAACTAGAAGAAATCTTTACTGATTTGGATATTTTGATACAGCAGCCTGAGCAGCAGGACAAGC
TGACCAGTATTCGCCGTTATTTTCATACCTTAAAAGGCTCCGGCCGGATGGTAGGAGCTAAAAGTTCCGGCGAGTTGGCT
TGGACGGTTGAAGATCTCTTGAATCGAATAATTGCTAAAACACAGGCTTTTACCCTGGCGATCAGTCGTTATGTAGAATT
AGTCTTTAAGATTTACAAATACAAGTTATTTTATAACTTTAAAAATAGTCAGCCTCATGCGATTGATTTGCGTCCCCTCG
TATTGATCGGGCAACAACTGCAACAGCATGGCAGTCTTGAACCGGCACTTGAGGAATTGCTGGAGCTTAGCTGGACCTTA
TGTTCGCCTGAGACAGTCACCGGGCTTGAGCTGGTGGAACATACAGCAGAGACTCTACCACCACTAGGTGTAGAGAAGCT
TGAAATTCACGAGGAATTTGATTCACTAACTGCCGAGACACTGGCGATCTTTCTTGAAGAGTCGGAAGAACATCTGGCAA
CTATTGATGAGTTCTTGAATAATAATGAACAGGGCAGTAATTATAATGCTCTAATCCGCGCTTTACATACTTTGCGTGGC
AGCTCGGCCATGGCTCAGGTAGAACACATATTTGAAGCAAGTAGTAAAATTGAAAATCTGTTTAAAACCATGCTGCAAGA
TGAGCTGGTATCTACTTCAAATGAAACCGCTTTACTTACTCATTATGCTGAATTTGTAAGGGATTATCTCTACATTCTAA
AACAGGAATGTAATATAGAACAGTTGGAACGGGTTTATCAGACCTTTAATCATGCTTGGGAAAACTACGGATTTCATCAA
GAACCTGTGGATGATCTCGTGAACCCTCAAGGTCTGGTTTCAAGGCTCCTCGAGCTTGAGATCAACCAGTTGCTAGATGC
CGAGTTCGAGTTTGATCAGCGTACCCGTACCGAATATCCAGAATATTTACAGCTTTTGGTACAGCAGGCACAGGAACTGG
TTGAACATACACGAAACCGTGCCTCCCAAGGTGTATATGATTTTACGTTAGAACTACTTCAGAGCTATCAGCAGCTCTTG
GCAAAGCCACAGCTATTAAATCTTGATTATGCATATGAACTTTATACTCAAGCTCATCAGCAGCTGATTTATCTGTTTGA
TACGCTTGCAGCGGGACAGCGTGTCAGCCTGAGCCCGGCTCATCAAAGTCTGCTTGAAGAATTATCTGCATTTGTACAGC
AAGAAATACAACAGGTAGATGAGTTGTCCACTGTTACTGAGCCTTTTGAGGCTCCGGTTGACGTAGCAGTTTTGCAACAT
ACTTTCAACCTGGGAGCGCTTTCAGCACGTATAGCGGCTGATAAAGCGCTGATGCATTCTGAACATAGTAATCAGGTTGC
TGATGCTGATCTGCGCGATATCTTCTTGGAAGAGGCCGAAGAATTACTGGCTGGTATGGATAGTGACCTGAACAGTTGGA
CAAAAGAATCAGGCCAAGTTACTGCTCTGAACAATCTAATGCGTTATTTGCATACCTTAAAAGGTGGTGCAAACATGGTG
CAGGCCACCCATATGGGATTAATTGCACATGAGCTGGAAAGCATTTATCAGAGAATTATTAACGGGCAGGTTCAGGTCTC
TACTGTACTGATGAGTATTATCCGGCTGGTACAGGATGAGCTGGCAGAACGCATCCAGATACTACGTGAACAGCAGATTG
ACTACCCGGCGCCAGCAACTATTGAAATCCTCAAAAATATTGAGTCGATCAGCACTGGTGTATTAGTGACTACGGCTGAG
CCAAAAGTAGCAGAAGAGAAGCTGTCCGAGTCGAGTCAAAATATTGAATCAGATATAACTGATTGTACACTTGCGGATGC
GGAAATCGCTGAGCATTCCGAAGAGTTACAAACAAATGAACAGGTAAGATCAATTGTTGAAGAAGTTTTTCTCGAGGAAG
CCGAAGAGCTGTTACAGACCGCTCATAAATTACTAGATCAATGGGTAGAAGAGCGCAGTAACCGGAGTCTGTTACTACAG
CTGCAACGGAATGCTCATAGTCTTAAGGGCGGCGCACGGATGGCCGAGCTTGAGCCGGTAGCCGTGATTGCTTATGCGCT
GGAAAATACTTTTGAACAATTTGGTCTGCACAATCTTACCACTAGTGTTTATGACCCGCTTTTACATACTGCTTTACGCT
GGTTGGAAAATGCTATCTTCAAAGAGCAGTATGAAAACTTTGACAGTTTGAAGCACAGCTTGGACTCGATCCAGTTTACT
GAAATTCCTGCTCAGCTCATCAATCAGATTCCTGCAGATAATATCGTAGCTGATGGCAGTCTGTTTGAATTCGTGCATGG
TGATGGTACTGAACCGCCTTCCATGATGGGTGAATGGGACAATACAGAGCGGACTGAAAATAATGAAATGATCCGGATTT
CAGCCGATCTGGTTGAGAAAATGATTGATCTTGCAGGTGAAAACTCCATCAACCGTTCCCGTATTGAAATGGATGTGGGA
CAGGTCGGTTCTATTCTTTCCGACATGGAACTGGCTATTCAACGACTGGCTGACCAGTTACGCCGTATGGAGGGTGAGCT
TGAGAGTCAGATTATTGCTAAGCATGGTACAGAGAATTCACGTTATAGTGATTTTGATCCTTTAGAAATGGATCAGTATT
CTTCGCTAAATCAGTTATCCAAATCACTGGCTGAGTCAGCATCTGACTTACTTGACTTTAAAACCACATTATCTGAAAAA
ATACGTGATACTGAAGGTCTGCTATTACAGCAGTCAAGGATTCAGGCAGAGATTCAGGAAAACCTGATGCGGACCCGTCT
GGTACCCTTTTCTCGATTATTACCGCGTTTACAGCGCATAGCACGGCAGACCTCTTCAGCACTAAACCGTCCTGCAGAAC
TCGTTGTTCAAAACACTGAAGGAGAGCTGGACCGCAATATTTTAGAGCGACTGGTCACCCCGCTTGAACATATGCTGCGA
AATGCAATTGATCATGGTATTGAAACCATTGAGCAGCGTCTCAAGCAAGGGAAACCTGAAAGTGGCCGTATTGAGCTAAA
TATTAATCGCCAAGGTACAGATGTCATCATTACTTTTACAGATGATGGCCAAGGTATTAATCTTGACAAGCTGAAAAATA
AAGCACTAGAGCGAGGCCTGATTGGAGCGGAACAAAAACTGGAAGCTGAAGAGCTGGCCCAGTTGATTTTCCATCCAGGT
TTAAGCACTGCAGCAGAAATTACCCAGATTTCTGGTCGTGGTGTAGGGCTGGATGTGGTACAGAGCAGTATCAAGGCGAT
GGGTGGTCACGTGACGGTCGAGTCTGTACAGGGGCAGGGTACAACATTTACGATTCGTGTACCAACTACAGTAGCAATCA
GTGATGCCCTGATGGTTAAAGCAGGTGACCAGCAATATGCTGTACCATTGGCGCAGATTGAACGTATTGTGCGTATCTCT
CCTTCTATGCTGGAAGACTATTTTGCTGGCAAAGAAGATACTTTCCGTATCGACAATATGTATTATAAGCTGCGTTATCT
TTCAGAGTTTGTAGCAAATCAGTCTCTGCCTCGTCTTACCGGTATAGCCCACTCTCTGCCGGTACTGCTGATTAAAGGGA
GCAGTGGCCAGACAGTAGCGTTACTAGTTGACCAGCTGGTCGGATCTCGTGCACAAATTGTGGTGAAACCAGTGGGTCAA
CAGCTGGCTAGCGTAGGTGCAGTAGCTGGTGCAACAATTTTGGGTGATGGACAGGTTTGTCTCATTCTGGATGGGCAGTA
TATTGCTCGTCAGGTACAGTCTTCATTACGTGTCAAGGAAGTAAAAGAATCTCGTGAGTTGCATCGCTTTAATGATGAAC
GACGTCTGATTATGATCGTTGATGACTCAGTCACTGTACGCAAAGTCACCAGCCGATTGCTTGAGCGTCAAGGTTATGAT
GTAGTGACCGCTAAAGATGGTGTTGAAGCGATTGAACAGCTGGAAAGTATTAAGCCTGATTTAATGCTGCTCGATATTGA
AATGCCGCGTATGGATGGTTTTGAAGTAACTAATCTGGTACGTCATCATGATGTACATCGTAATATGCCAATTATTATGA
TTACTTCACGTACAGGTGAGAAACATCGTGAGCGCGCTTTTGCACTCGGAGCAACGCAATATATGGGCAAACCTTTCCAG
GAAGCAGACCTGTTGGCCAATATTGAAGCGTTACTTGAGGTTATGGTCTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1033-1169)

Response regulator receiver domain (Response_reg)

(1337-1448)

Hpt domain (Hpt)

(25-88)

Hpt domain (Hpt)

(510-601)

Hpt domain (Hpt)

(688-765)

Hpt domain (Hpt)

(199-277)

CheW-like domain (CheW)

(1176-1312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.851

100

0.638

Multiple sequence alignment