Detailed information NTG0276473

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: Eco118UI_RS17870
• Genome accession: NZ_CP032515
• Coordinates: 3558656..3559888 (+)
• Length: 410 a.a.
• NCBI ID: WP_001161834.1
• Uniprot ID: -
• Organism: Escherichia coli strain 118UI
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3553656..3564888

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Eco118UI_RS17855 (Eco118UI_18005)	-	3554171..3555847 (+)	1677	WP_001323195.1	polysaccharide biosynthesis/export family protein	-
Eco118UI_RS17860 (Eco118UI_18010)	kdsB	3555857..3556597 (+)	741	WP_000030749.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
Eco118UI_RS17865 (Eco118UI_18015)	-	3556594..3558621 (+)	2028	WP_000579512.1	capsular polysaccharide biosynthesis protein	-
Eco118UI_RS17870 (Eco118UI_18020)	kpsS	3558656..3559888 (+)	1233	WP_001161834.1	capsular biosynthesis protein	Regulator
Eco118UI_RS17875 (Eco118UI_18025)	-	3560134..3561243 (+)	1110	Protein_3421	IS3 family transposase	-
Eco118UI_RS17880 (Eco118UI_18030)	-	3561461..3563038 (-)	1578	WP_000600936.1	hypothetical protein	-
Eco118UI_RS17885 (Eco118UI_18035)	-	3563035..3563406 (-)	372	WP_001309753.1	capsular polysaccharide biosynthesis protein	-
Eco118UI_RS17890 (Eco118UI_18040)	-	3563387..3564133 (-)	747	WP_000497656.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 48905.37 Da
• Isoelectric Point: 10.0344

>NTDB_id=276473 Eco118UI_RS17870 WP_001161834.1 3558656..3559888(+) (kpsS) [Escherichia coli strain 118UI]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWHEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDIKLFKKFRGYLLVKTQVNWVYYSNSNLCAYNSK
WAHVNLMDYN

Nucleotide

• Length: 1233 bp

>NTDB_id=276473 Eco118UI_RS17870 WP_001161834.1 3558656..3559888(+) (kpsS) [Escherichia coli strain 118UI]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGATGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCCTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTAAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGCATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAATGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGGCTTAGGCGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACAATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGATTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCAGATATAAAACTGTTTAAGAAGT
TTCGCGGGTATTTATTGGTTAAGACGCAGGTTAATTGGGTTTATTATTCCAATAGTAATCTATGTGCATATAATAGTAAG
TGGGCTCATGTTAATTTAATGGATTATAATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.898	95.366	0.38