Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | C6N19_RS11425 | Genome accession | NZ_CP027250 |
| Coordinates | 2114504..2114884 (-) | Length | 126 a.a. |
| NCBI ID | WP_002121425.1 | Uniprot ID | A0A009HD22 |
| Organism | Acinetobacter pittii strain WCHAP100004 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2109504..2119884
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N19_RS11395 (C6N19_11295) | tadA | 2109508..2110011 (-) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
| C6N19_RS11400 (C6N19_11300) | hibch | 2110017..2111141 (-) | 1125 | WP_016803061.1 | enoyl-CoA hydratase/isomerase family protein | - |
| C6N19_RS11405 (C6N19_11305) | ung | 2111138..2111851 (-) | 714 | WP_002121342.1 | uracil-DNA glycosylase | - |
| C6N19_RS11410 (C6N19_11310) | - | 2111905..2112501 (-) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| C6N19_RS11415 (C6N19_11315) | gspK | 2112729..2113688 (-) | 960 | WP_106405888.1 | type II secretion system minor pseudopilin GspK | - |
| C6N19_RS11420 (C6N19_11320) | xcpW | 2113689..2114504 (-) | 816 | WP_002121460.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| C6N19_RS11425 (C6N19_11325) | xcpV | 2114504..2114884 (-) | 381 | WP_002121425.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| C6N19_RS11430 (C6N19_11330) | - | 2114874..2115428 (-) | 555 | WP_002121405.1 | type II secretion system protein | - |
| C6N19_RS11435 (C6N19_11335) | - | 2115435..2116043 (-) | 609 | WP_002121414.1 | TetR/AcrR family transcriptional regulator | - |
| C6N19_RS11440 (C6N19_11340) | ycfH | 2116080..2116853 (-) | 774 | WP_002121462.1 | TatD family hydrolase | - |
| C6N19_RS11445 (C6N19_11345) | pilZ | 2116871..2117212 (-) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| C6N19_RS11450 (C6N19_11350) | holB | 2117223..2118203 (-) | 981 | WP_002121362.1 | DNA polymerase III subunit delta' | - |
| C6N19_RS11455 (C6N19_11355) | kdsB | 2118217..2118978 (-) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=276037 C6N19_RS11425 WP_002121425.1 2114504..2114884(-) (xcpV) [Acinetobacter pittii strain WCHAP100004]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=276037 C6N19_RS11425 WP_002121425.1 2114504..2114884(-) (xcpV) [Acinetobacter pittii strain WCHAP100004]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |