Detailed information NTG0276036

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: C6N19_RS11420
• Genome accession: NZ_CP027250
• Coordinates: 2113689..2114504 (-)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain WCHAP100004
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2108689..2119504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6N19_RS11390 (C6N19_11290)	-	2108997..2109437 (-)	441	WP_002121449.1	SRPBCC family protein	-
C6N19_RS11395 (C6N19_11295)	tadA	2109508..2110011 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
C6N19_RS11400 (C6N19_11300)	hibch	2110017..2111141 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
C6N19_RS11405 (C6N19_11305)	ung	2111138..2111851 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
C6N19_RS11410 (C6N19_11310)	-	2111905..2112501 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
C6N19_RS11415 (C6N19_11315)	gspK	2112729..2113688 (-)	960	WP_106405888.1	type II secretion system minor pseudopilin GspK	-
C6N19_RS11420 (C6N19_11320)	xcpW	2113689..2114504 (-)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
C6N19_RS11425 (C6N19_11325)	xcpV	2114504..2114884 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
C6N19_RS11430 (C6N19_11330)	-	2114874..2115428 (-)	555	WP_002121405.1	type II secretion system protein	-
C6N19_RS11435 (C6N19_11335)	-	2115435..2116043 (-)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
C6N19_RS11440 (C6N19_11340)	ycfH	2116080..2116853 (-)	774	WP_002121462.1	TatD family hydrolase	-
C6N19_RS11445 (C6N19_11345)	pilZ	2116871..2117212 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
C6N19_RS11450 (C6N19_11350)	holB	2117223..2118203 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
C6N19_RS11455 (C6N19_11355)	kdsB	2118217..2118978 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=276036 C6N19_RS11420 WP_002121460.1 2113689..2114504(-) (xcpW) [Acinetobacter pittii strain WCHAP100004]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=276036 C6N19_RS11420 WP_002121460.1 2113689..2114504(-) (xcpW) [Acinetobacter pittii strain WCHAP100004]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738