Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   C3V41_RS02650 Genome accession   NZ_CP027236
Coordinates   650951..652756 (+) Length   601 a.a.
NCBI ID   WP_106108988.1    Uniprot ID   -
Organism   Actinomyces sp. oral taxon 897 strain F0631     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 645951..657756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3V41_RS02625 (C3V41_02625) - 646114..646713 (+) 600 WP_106110611.1 TetR family transcriptional regulator -
  C3V41_RS02630 (C3V41_02630) - 646876..647652 (+) 777 WP_106108985.1 ABC transporter ATP-binding protein -
  C3V41_RS02635 (C3V41_02635) - 647649..648395 (+) 747 WP_106108986.1 ABC transporter permease -
  C3V41_RS02640 (C3V41_02640) - 648617..649720 (+) 1104 WP_200511015.1 zinc-binding dehydrogenase -
  C3V41_RS02645 (C3V41_02645) - 650075..650776 (+) 702 WP_129591460.1 MarR family winged helix-turn-helix transcriptional regulator -
  C3V41_RS02650 (C3V41_02650) rcrP 650951..652756 (+) 1806 WP_106108988.1 ABC transporter ATP-binding protein Regulator
  C3V41_RS02655 (C3V41_02655) - 652749..654662 (+) 1914 WP_217350949.1 ABC transporter ATP-binding protein -
  C3V41_RS02660 (C3V41_02660) - 654788..655870 (+) 1083 WP_106108989.1 PhoH family protein -
  C3V41_RS02665 (C3V41_02665) ybeY 655860..656318 (+) 459 WP_106108990.1 rRNA maturation RNase YbeY -
  C3V41_RS02670 (C3V41_02670) - 656315..657589 (+) 1275 WP_106108991.1 hemolysin family protein -

Sequence

Protein


Download         Length: 601 a.a.        Molecular weight: 63958.30 Da        Isoelectric Point: 6.7579

>NTDB_id=275960 C3V41_RS02650 WP_106108988.1 650951..652756(+) (rcrP) [Actinomyces sp. oral taxon 897 strain F0631]
MLNVLRRLPPRERRMAGTALVFIVLQVWLDLRLPDYMSTITTLVTTQDSAMGEVLRQGGYMLACALGSMACAVAVGYLAA
RTAAGLARSLREEVFDHSLAFSDAEVDRFSAPSLINRVTNDVTQIQGVIAMGMQAVVKAPILAVWAVIKISGKAWEWTTA
TAVAVIVLCTMLGVIIVVAIPRFQRIQGLTDVLGRVSREQLTGIRVVRAYNAEAYQERKFAGANDDLTGNNLVANRVMAI
MGPGMIFISSGLTLSVYAIGAHLVEAAAGADRVALFADMVVFSNYAMQVVMAFMLLTLVFILLPRAQVSARRITEVLRTV
PSVADGATADRAPSAAPGQGTGQEGTGQEAGSVTFENVSFRYAGAGDDALTDISFTALAGQTVAFIGATGSGKSTLVNLV
PRFADVTAGRVLVDGRDVRDHALSDLRDRIGYVPQRSYLFSGTVASNVAYPHGDELTEQGRDAVGRALETAQASGFVAEM
EGGADATITQGGTNVSGGQRQRLSIARTLAASPGILIFDDSFSALDYTTDRALRRALARRDPRATTLVVAQRIGTIRDAD
QIIVLEHGQVVGQGTHAELLATCPTYQQIASSQLSKEELRA

Nucleotide


Download         Length: 1806 bp        

>NTDB_id=275960 C3V41_RS02650 WP_106108988.1 650951..652756(+) (rcrP) [Actinomyces sp. oral taxon 897 strain F0631]
ATGCTGAACGTCCTGAGACGTCTTCCCCCCAGGGAGAGGCGTATGGCGGGCACCGCCCTCGTCTTTATCGTGCTCCAGGT
CTGGCTGGATCTGAGGCTCCCGGACTACATGTCCACCATTACCACCCTGGTGACCACCCAGGACTCGGCCATGGGCGAGG
TGCTCAGGCAGGGCGGCTACATGCTCGCCTGCGCCCTGGGCTCCATGGCCTGCGCGGTCGCCGTGGGCTACCTCGCCGCC
CGCACCGCCGCGGGCCTGGCCCGCTCTCTGCGCGAGGAGGTCTTTGACCACTCCCTGGCCTTCTCCGACGCCGAGGTCGA
CCGGTTCTCGGCACCGAGCCTGATCAACCGCGTCACCAACGACGTCACCCAGATCCAGGGCGTCATCGCCATGGGCATGC
AGGCCGTGGTCAAGGCCCCCATCCTCGCGGTGTGGGCGGTCATTAAGATCTCGGGCAAGGCCTGGGAGTGGACCACCGCC
ACGGCCGTGGCCGTCATTGTCCTGTGCACAATGCTCGGGGTCATTATCGTCGTGGCCATCCCGCGCTTCCAGCGCATCCA
GGGCCTCACCGACGTCCTGGGGAGGGTCTCGCGCGAGCAGCTCACCGGCATCCGCGTGGTGCGCGCCTACAACGCCGAGG
CGTACCAGGAGCGCAAGTTCGCCGGTGCCAATGACGACCTCACCGGCAACAACCTCGTGGCCAACCGGGTCATGGCGATT
ATGGGCCCTGGTATGATCTTTATCTCCTCGGGCCTGACCCTGTCGGTCTACGCCATTGGCGCCCACCTCGTCGAGGCCGC
CGCCGGAGCGGACCGCGTGGCCCTCTTCGCGGACATGGTGGTCTTCTCCAACTACGCCATGCAGGTCGTCATGGCCTTTA
TGCTCCTGACGCTGGTCTTTATCCTCCTGCCGCGCGCCCAGGTCTCCGCCCGCCGCATTACCGAGGTCCTGCGCACCGTC
CCCAGCGTCGCCGACGGCGCCACGGCCGACAGGGCCCCATCGGCCGCGCCCGGCCAGGGGACCGGCCAGGAGGGGACCGG
CCAGGAGGCCGGTAGCGTCACCTTCGAGAACGTGTCCTTCCGCTACGCGGGGGCGGGCGACGACGCCCTGACTGACATCA
GCTTCACCGCCCTGGCCGGCCAGACGGTCGCCTTTATCGGCGCCACCGGAAGCGGCAAGTCCACCCTGGTCAACCTCGTC
CCCCGCTTCGCCGACGTCACTGCCGGACGTGTCCTCGTGGACGGCCGGGACGTGCGCGACCACGCCCTGAGCGACCTGCG
CGACCGTATCGGCTACGTGCCCCAGCGCTCCTACCTCTTTAGCGGGACCGTGGCCTCCAACGTCGCCTACCCCCATGGGG
ACGAGCTCACCGAGCAGGGGCGTGACGCCGTGGGGCGGGCCCTGGAGACCGCCCAGGCCTCCGGGTTCGTCGCCGAGATG
GAGGGCGGGGCCGACGCCACCATCACCCAGGGCGGTACCAACGTCTCCGGCGGGCAGCGCCAGCGCCTGTCCATTGCCCG
GACCCTGGCCGCCAGCCCCGGGATCCTCATCTTCGACGACTCCTTCTCGGCCCTGGACTACACCACCGACCGCGCCCTGC
GCCGCGCCCTGGCCCGGCGCGACCCGCGCGCCACCACCCTCGTGGTGGCCCAGCGCATTGGCACCATCCGCGACGCCGAC
CAGATCATCGTCCTGGAGCACGGCCAGGTGGTGGGCCAGGGGACCCACGCGGAGCTCCTCGCCACCTGCCCCACCTACCA
GCAGATCGCCAGCTCTCAGCTCAGCAAGGAGGAGCTCCGTGCCTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(19-293)

ABC transporter (ABC_tran)

(370-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

51.382

100

0.526

Multiple sequence alignment