Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C2E19_RS27775 Genome accession   NZ_CP027218
Coordinates   6033339..6033743 (-) Length   134 a.a.
NCBI ID   WP_116028398.1    Uniprot ID   -
Organism   Pseudomonas sp. DTU12.3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6028339..6038743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2E19_RS27760 (C2E19_27805) - 6030159..6032219 (-) 2061 WP_129395893.1 methyl-accepting chemotaxis protein -
  C2E19_RS27765 (C2E19_27810) - 6032363..6032902 (-) 540 WP_129395894.1 chemotaxis protein CheW -
  C2E19_RS27770 (C2E19_27815) pilH 6032913..6033278 (-) 366 WP_008084306.1 twitching motility response regulator PilH -
  C2E19_RS27775 (C2E19_27820) pilG 6033339..6033743 (-) 405 WP_116028398.1 twitching motility response regulator PilG Regulator
  C2E19_RS27780 (C2E19_27825) gshB 6033969..6034940 (+) 972 WP_129395895.1 glutathione synthase -
  C2E19_RS27785 (C2E19_27830) - 6035048..6035947 (+) 900 WP_064388085.1 energy transducer TonB -
  C2E19_RS27790 (C2E19_27835) - 6036122..6036694 (+) 573 WP_129395896.1 YqgE/AlgH family protein -
  C2E19_RS27795 (C2E19_27840) ruvX 6036694..6037131 (+) 438 WP_007913667.1 Holliday junction resolvase RuvX -
  C2E19_RS27800 (C2E19_27845) pyrR 6037212..6037718 (+) 507 WP_016985973.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14565.97 Da        Isoelectric Point: 7.1346

>NTDB_id=275809 C2E19_RS27775 WP_116028398.1 6033339..6033743(-) (pilG) [Pseudomonas sp. DTU12.3]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=275809 C2E19_RS27775 WP_116028398.1 6033339..6033743(-) (pilG) [Pseudomonas sp. DTU12.3]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACATTGTT
GAAGAATGTCGGTTGCGAAGTGATCACGGCGATCGACGGTTTCGACGCCTTGGCGAAGATCGCCGACAACCATCCCGGGA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCATTCAAG
GCCACGCCGGTGATCATGCTGTCATCGCGTGACGGACTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCCAGGCCCATGTTCCGGGCTTCGCCGCCGTTCTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.4

93.284

0.694

Multiple sequence alignment