Detailed information NTG0275616

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: D3Z18_RS07890
• Genome accession: NZ_CP032316
• Coordinates: 1440785..1441735 (+)
• Length: 316 a.a.
• NCBI ID: WP_002884485.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain HPC5
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1435785..1446735

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D3Z18_RS07865 (D3Z18_07865)	-	1436044..1436733 (-)	690	WP_251822095.1	glycosyltransferase family 2 protein	-
D3Z18_RS07870 (D3Z18_07870)	-	1436726..1437934 (-)	1209	WP_038401456.1	glycosyltransferase family 2 protein	-
D3Z18_RS07875 (D3Z18_07875)	-	1438012..1438983 (-)	972	WP_011049888.1	glycosyltransferase	-
D3Z18_RS07880 (D3Z18_07880)	-	1438976..1439862 (-)	887	Protein_1530	glycosyltransferase	-
D3Z18_RS07885 (D3Z18_07885)	waaV	1439916..1440726 (-)	811	Protein_1531	glycosyltransferase family 2 protein	-
D3Z18_RS07890 (D3Z18_07890)	waaF	1440785..1441735 (+)	951	WP_002884485.1	lipopolysaccharide heptosyltransferase II	Regulator
D3Z18_RS07895 (D3Z18_07895)	-	1441721..1442485 (-)	765	WP_038401458.1	glycosyltransferase family 25 protein	-
D3Z18_RS07900 (D3Z18_07900)	gmhA	1442485..1443045 (-)	561	WP_038401460.1	D-sedoheptulose 7-phosphate isomerase	-
D3Z18_RS07905 (D3Z18_07905)	rfaE1	1443042..1444427 (-)	1386	WP_038401463.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
D3Z18_RS07910 (D3Z18_07910)	rfaD	1444420..1445373 (-)	954	WP_038401465.1	ADP-glyceromanno-heptose 6-epimerase	-
D3Z18_RS07915 (D3Z18_07915)	gmhB	1445374..1445935 (-)	562	Protein_1537	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
D3Z18_RS07920 (D3Z18_07920)	-	1446016..1446318 (+)	303	WP_002852762.1	cytochrome c	-
D3Z18_RS07925 (D3Z18_07925)	ccoS	1446341..1446547 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36240.79 Da
• Isoelectric Point: 10.2878

>NTDB_id=275616 D3Z18_RS07890 WP_002884485.1 1440785..1441735(+) (waaF) [Campylobacter jejuni subsp. jejuni strain HPC5]
MKIFIHLPTWLGDAVMASPALYVIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
SFGNAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLNLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=275616 D3Z18_RS07890 WP_002884485.1 1440785..1441735(+) (waaF) [Campylobacter jejuni subsp. jejuni strain HPC5]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGTTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAATCCTGGTGCA
AGCTTTGGAAATGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCACATAAGTGCAGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACAAAATTTACTCAAACCTCACC
TTGGCAAAATGAAAACGCAACATTAGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.332	99.051	0.915